RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PHF11Q9UIL8 331 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 LSM2Q9Y333 95 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 KLF2Q9Y5W3 355 aaPredicted RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 NUBP2Q9Y5Y2 271 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 DSPPQ9NZW4 1301 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 EDDM13A0A1B0GTR0 161 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 HEXBP07686 556 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 FGF2P09038 288 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ANXA7P20073 488 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 MAT2AP31153 395 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 PCBP4P57723 403 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 TAS2R41P59536 307 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 CDK3Q00526 305 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 DEFA6Q01524 100 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 SNTB1Q13884 538 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 SSX2Q16385 188 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 GSG1Q2KHT4 349 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 SYT14P1Q58G82 188 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 GSG1LQ6UXU4 331 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 PUSL1Q8N0Z8 303 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 PROKR2Q8NFJ6 384 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 OR1S1Q8NH92 325 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 OR5K2Q8NHB8 316 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 SCARB1Q8WTV0 552 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 PPP1R16AQ96I34 528 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 FCRL4Q96PJ5 515 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ZNF251Q9BRH9 671 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 AUNIPQ9H7T9 357 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 MED11Q9P086 117 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 SLC13A4Q9UKG4 626 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 GPR34Q9UPC5 381 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ATG4BQ9Y4P1 393 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 C17orf113A0A1B0GUU1 675 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 C4orf51C9J302 202 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 C5orf67F2Z3F1 127 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 SGK494L7N484 410 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 GABRPO00591 440 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 RAB36O95755 333 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 RLN1P04808 185 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 HNRNPA1P09651 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMG6-202ENST00000354901 RAD52P43351 418 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 WNT4P56705 351 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 UBE2IP63279 158 aaKnown RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 EEF1A1P68104 462 aaKnown RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 CSNK1G2P78368 415 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 BLOC1S1P78537 153 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 EEF1A1P5Q5VTE0 462 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 OR4C11Q6IEV9 310 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 SLC30A6Q6NXT4 461 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 TMUB2Q71RG4 321 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 VRK2Q86Y07 508 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 KLBQ86Z14 1044 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 SPAG16Q8N0X2 631 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 SLC25A28Q96A46 364 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 FAM46AQ96IP4 442 aaKnown RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 AMDHD1Q96NU7 426 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 INSM2Q96T92 566 aaPredicted RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 PTDSS2Q9BVG9 487 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 CERS4Q9HA82 394 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 FZD3Q9NPG1 666 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 MARK1Q9P0L2 795 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 CHST2Q9Y4C5 530 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 ZNF705EA8MWA4 302 aaPredicted RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 VEGFDO43915 354 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 SELENOFO60613 162 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 FMO6PO60774 539 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 WNT1P04628 370 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 AHCYP23526 432 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 NFYBP25208 207 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 NTSP30990 170 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 S100A11P31949 105 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 BTCP35070 178 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 PITPNBP48739 271 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 PPT1P50897 306 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 CLDN2P57739 230 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 SNRPGP62308 76 aaKnown RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 PDZK1IP1Q13113 114 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 TDGQ13569 410 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 ACER2Q5QJU3 275 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 TMEM240Q5SV17 173 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 LINGO2Q7L985 606 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 LDLRAD3Q86YD5 345 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 ARL6IP6Q8N6S5 226 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 OR4F15Q8NGB8 312 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 OR14A16Q8NHC5 309 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 ACOT12Q8WYK0 555 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 OTUB2Q96DC9 234 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 ZNF582Q96NG8 517 aaPredicted RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 MCOLN1Q9GZU1 580 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 AICDAQ9GZX7 198 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 RNF32Q9H0A6 362 aa8.69□□□□□ -1.02
SMG6-202ENST00000354901 GPR55Q9Y2T6 319 aaPredicted RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 MDC1Q14676 2089 aaKnown RBP8.69□□□□□ -1.02
SMG6-202ENST00000354901 A0A1W2PPV9 198 aa8.68□□□□□ -1.02
SMG6-202ENST00000354901 C7orf66A4D0T2 115 aa8.68□□□□□ -1.02
SMG6-202ENST00000354901 OR6C65A6NJZ3 312 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms