RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 QPRTQ15274 297 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 TCTE1Q5JU00 501 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 IDNKQ5T6J7 187 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 BCORP1Q8N888 145 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 TEX19Q8NA77 164 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 POMGNT2Q8NAT1 580 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 FAM98AQ8NCA5 519 aaKnown RBP20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 OR52E2Q8NGJ4 325 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 C16orf52Q8NHV5 167 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 SLC38A3Q99624 504 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 TMEM43Q9BTV4 400 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 RBFOX1Q9NWB1 397 aaKnown RBP20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 ZMIZ1Q9ULJ6 1067 aa20.46■□□□□ 0.87
NKX2-1-201ENST00000354822 OR2T7P0C7T2 308 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 CHRNB1P11230 501 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 KIR2DL3P43628 341 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 MAP2K3P46734 347 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 ERV3-1Q14264 604 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 P2RY14Q15391 338 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 ATAD3CQ5T2N8 411 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 FAAH2Q6GMR7 532 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 PAMR1Q6UXH9 720 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 DPY19L2P2Q6ZN68 376 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 LRRC28Q86X40 367 aaPredicted RBP20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 OR2T27Q8NH04 317 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 MMABQ96EY8 250 aaPredicted RBP20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 SLC19A3Q9BZV2 496 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 ERVK-19Q9WJR5 959 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 E9PI62 339 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 SERPINA3P01011 423 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 SHC1P29353 583 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 OR12D2P58182 307 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 ACTA2P62736 377 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 ACTG2P63267 376 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 DMKNQ6E0U4 476 aaPredicted RBP20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 PLET1Q6UQ28 207 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 CEACAM19Q7Z692 300 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 PXKQ7Z7A4 578 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 DUSP18Q8NEJ0 188 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 TTYH2Q9BSA4 534 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 LRIT1Q9P2V4 623 aa20.45■□□□□ 0.86
NKX2-1-201ENST00000354822 CHURC1-FNTBB4DL54 471 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 H0YIG0 161 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 SC5DO75845 299 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 TALDO1P37837 337 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 INPP1P49441 399 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 PGDP52209 483 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 SLC3A1Q07837 685 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 GGTLC2Q14390 218 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 SF3A2Q15428 464 aaKnown RBP20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 ISXQ2M1V0 245 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 ZNF615Q8N8J6 731 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 KCNJ15Q99712 375 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 OR2B2Q9GZK3 357 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 CHRNA10Q9GZZ6 450 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 FBXL4Q9UKA2 621 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 ZNF337Q9Y3M9 751 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 IFNA16P05015 189 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 NME1P15531 152 aaKnown RBP20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 HIST1H1CP16403 213 aaKnown RBP20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 GABRA4P48169 554 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 E2F1Q01094 437 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 SYS1Q8N2H4 156 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 NLGN4YQ8NFZ3 816 aaPredicted RBP20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 OR7G1Q8NGA0 311 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 OR4C3Q8NH37 302 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 MRPL48Q96GC5 212 aaKnown RBP20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 SNX18Q96RF0 628 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 CYSLTR2Q9NS75 346 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 MALT1Q9UDY8 824 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 N6AMT1Q9Y5N5 214 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 IER3IP1Q9Y5U9 82 aa20.44■□□□□ 0.86
NKX2-1-201ENST00000354822 TMEM131Q92545 1883 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 TDRD6O60522 2096 aaKnown RBP20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 IDH3BO43837 385 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 GYPBP06028 91 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 ELK1P19419 428 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 MAOAP21397 527 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 MLLT3P42568 568 aaPredicted RBP20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 NR4A2P43354 598 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 SRSF5Q13243 272 aaKnown RBP20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 TDGQ13569 410 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 PON3Q15166 354 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 TSTD1Q8NFU3 115 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 OR4K13Q8NH42 304 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 OR51Q1Q8NH59 317 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 TP53INP1Q96A56 240 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 ST6GAL2Q96JF0 529 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 PGLYRP3Q96LB9 341 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 CNN2Q99439 309 aaKnown RBP20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 EXTL2Q9UBQ6 330 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 EPHA6Q9UF33 1036 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 SLCO1B1Q9Y6L6 691 aa20.43■□□□□ 0.86
NKX2-1-201ENST00000354822 DVL2O14641 736 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 ARPC3O15145 178 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 IGF2P01344 180 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 HLA-DMAP28067 261 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 PYCR1P32322 319 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 ADH7P40394 386 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 NKX2-5P52952 324 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms