RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 CLCA1A8K7I4 914 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 TMEM229AB2RXF0 380 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 M0R3H8 397 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 CXCR1P25024 350 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 SHC1P29353 583 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 SLC7A1P30825 629 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 SRSF1Q07955 248 aaKnown RBP eCLIP12.54□□□□□ -0.4
SEC13-202ENST00000350697 CTU2Q2VPK5 515 aaKnown RBP12.54□□□□□ -0.4
SEC13-202ENST00000350697 C10orf67Q8IYJ2 551 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 MARVELD2Q8N4S9 558 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 ATP6V1C2Q8NEY4 427 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 OR6T1Q8NGN1 323 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 OR2V1Q8NHB1 315 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 VANGL1Q8TAA9 524 aaPredicted RBP12.54□□□□□ -0.4
SEC13-202ENST00000350697 C3orf49Q96BT1 292 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 CCDC120Q96HB5 630 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 TPD52L3Q96J77 140 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 GORASP2Q9H8Y8 452 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 TMEM27Q9HBJ8 222 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 MAGEL2Q9UJ55 1249 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 SH3GLB1Q9Y371 365 aa12.54□□□□□ -0.4
SEC13-202ENST00000350697 DOPEY1Q5JWR5 2465 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 SPTBN1Q01082 2364 aaKnown RBP12.53□□□□□ -0.4
SEC13-202ENST00000350697 A0A1B0GWA3 101 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 TNFSF11O14788 317 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 GSC2O15499 205 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 ZNF208O43345 1280 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 TPST2O60704 377 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 CIB2O75838 187 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 ZNF682O95780 498 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 SERPINA1P01009 418 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 GLI4P10075 376 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 HTR2AP28223 471 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
SEC13-202ENST00000350697 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
SEC13-202ENST00000350697 NUP107P57740 925 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 PMPCAQ10713 525 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 BNIP2Q12982 314 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 RIPK1Q13546 671 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 OR1Q1Q15612 314 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 NPTX1Q15818 432 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 SGCBQ16585 318 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 SYT14P1Q58G82 188 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 HBMQ6B0K9 141 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 CBLL1Q75N03 491 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 ATG4DQ86TL0 474 aaPredicted RBP12.53□□□□□ -0.4
SEC13-202ENST00000350697 CARM1Q86X55 608 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 OR4D11Q8NGI4 311 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 OR10D3Q8NH80 312 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
SEC13-202ENST00000350697 MCHR1Q99705 422 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 C12orf10Q9HB07 376 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 CLCF1Q9UBD9 225 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 RPS6KA6Q9UK32 745 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 SNX13Q9Y5W8 968 aa12.53□□□□□ -0.4
SEC13-202ENST00000350697 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.4
SEC13-202ENST00000350697 DOCK7Q96N67 2140 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 TMEM72A0PK05 275 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 SLC22A20A6NK97 555 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 KDM4EB2RXH2 506 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 ARPC2O15144 300 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 CXCL13O43927 109 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 LDLRP01130 860 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 TFPIP10646 304 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 CCNA2P20248 432 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 MSX2P35548 267 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 TIMP3P35625 211 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 SMSP52788 366 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 CARD18P57730 90 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 ELF3P78545 371 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 ADORA2A-AS1P86434 159 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 ALG10BQ5I7T1 473 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 ULK3Q6PHR2 472 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 NCCRP1Q6ZVX7 275 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 RBM45Q8IUH3 476 aaKnown RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 MBD3L2Q8NHZ7 208 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 RND1Q92730 232 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 OSTF1Q92882 214 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 WNT2BQ93097 391 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 DDIT4LQ96D03 193 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 ZNF845Q96IR2 970 aaPredicted RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 OR5B2Q96R09 309 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 TM9SF2Q99805 663 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 PCDHAC1Q9H158 963 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 COQ10BQ9H8M1 238 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 TIGARQ9NQ88 270 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 DCAF13Q9NV06 445 aaKnown RBP12.52□□□□□ -0.41
SEC13-202ENST00000350697 SELENONQ9NZV5 590 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 ZNF175Q9Y473 711 aa12.52□□□□□ -0.41
SEC13-202ENST00000350697 MPDZO75970 2070 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 KIAA1549Q9HCM3 1950 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 A0A0B4J2E0 115 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 A0A1B0GX12 115 aa12.51□□□□□ -0.41
SEC13-202ENST00000350697 A0A1W2PNR3 127 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms