RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ZNF620Q6ZNG0 422 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 SERPINA12Q8IW75 414 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 TFGQ92734 400 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-202ENST00000348987 GINS4Q9BRT9 223 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 LGR4Q9BXB1 951 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 ZCCHC3Q9NUD5 404 aaKnown RBP17.25■□□□□ 0.35
SCARF1-202ENST00000348987 ERVK-19Q9WJR5 959 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 VCANP13611 3396 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 HMSDA8MTL9 139 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 CDC42EP2O14613 210 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 KHDRBS3O75525 346 aaKnown RBP17.25■□□□□ 0.35
SCARF1-202ENST00000348987 PRKRAO75569 313 aaKnown RBP17.25■□□□□ 0.35
SCARF1-202ENST00000348987 PTHLHP12272 177 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 STAT5AP42229 794 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 H2BFSP57053 126 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 NIPAL3Q6P499 406 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 TMEM88Q6PEY1 159 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 SLC44A3Q8N4M1 653 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 PXT1Q8NFP0 134 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 NARS2Q96I59 477 aaKnown RBP17.25■□□□□ 0.35
SCARF1-202ENST00000348987 TTTY10Q9BZA0 68 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 ZCCHC2Q9C0B9 1178 aaKnown RBP17.25■□□□□ 0.35
SCARF1-202ENST00000348987 TAS2R5Q9NYW4 299 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 OPN4Q9UHM6 478 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 PLCL2Q9UPR0 1127 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 TRANK1O15050 2925 aa17.25■□□□□ 0.35
SCARF1-202ENST00000348987 KIF26AQ9ULI4 1882 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-202ENST00000348987 ADRB3P13945 408 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 FPR3P25089 353 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 POLR2GP62487 172 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCARF1-202ENST00000348987 S100A12P80511 92 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 LGALS3BPQ08380 585 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 MAPK14Q16539 360 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 C18orf63Q68DL7 685 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 HEPHL1Q6MZM0 1159 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 MEPCEQ7L2J0 689 aaKnown RBP17.24■□□□□ 0.35
SCARF1-202ENST00000348987 BPIFCQ8NFQ6 507 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 DIO2Q92813 273 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 PNPLA2Q96AD5 504 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 MACROD1Q9BQ69 325 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 DNTTIP1Q9H147 329 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 DPEP2Q9H4A9 486 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 FLRT2O43155 660 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 EGFP01133 1207 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 ATP1B1P05026 303 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 ADH5P11766 374 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 FNTBP49356 437 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 UBE2MP61081 183 aaKnown RBP17.24■□□□□ 0.35
SCARF1-202ENST00000348987 MAT1AQ00266 395 aaKnown RBP17.24■□□□□ 0.35
SCARF1-202ENST00000348987 ST3GAL3Q11203 375 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 TRAM1Q15629 374 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 VRK2Q86Y07 508 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 ZNF784Q8NCA9 323 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-202ENST00000348987 OR10K1Q8NGX5 313 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 RAD51AP1Q96B01 352 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 DERL3Q96Q80 235 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 MS4A8Q9BY19 250 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 SEMA4CQ9C0C4 833 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 UBQLN3Q9H347 655 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 TAS2R3Q9NYW6 316 aa17.24■□□□□ 0.35
SCARF1-202ENST00000348987 GLOD5A6NK44 160 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 SNAPC5O75971 98 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 HMGN1P05114 100 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 PYCR1P32322 319 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 LTB4RQ15722 352 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 FNDC3BQ53EP0 1204 aaKnown RBP17.23■□□□□ 0.35
SCARF1-202ENST00000348987 ZNF311Q5JNZ3 666 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 FAM74A1Q5RGS3 127 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 C17orf64Q86WR6 236 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 OR5J2Q8NH18 312 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 TMEM255BQ8WV15 326 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 NSMAFQ92636 917 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 LINC00615Q96LM1 132 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-202ENST00000348987 GPN1Q9HCN4 374 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-202ENST00000348987 KCNE3Q9Y6H6 103 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 CEP290O15078 2479 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 ADAM11O75078 769 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 PRNPP04156 253 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 ASGR2P07307 311 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 NDUFV2P19404 249 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 FUT1P19526 365 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 ELFN2Q5R3F8 820 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 ELP2Q6IA86 826 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 LCTLQ6UWM7 567 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 BAIAP2L2Q6UXY1 529 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 ADCK2Q7Z695 626 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 GID4Q8IVV7 300 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 BADQ92934 168 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 UBE2E3Q969T4 207 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 SLC39A1Q9NY26 324 aa17.23■□□□□ 0.35
SCARF1-202ENST00000348987 C17orf113A0A1B0GUU1 675 aa17.22■□□□□ 0.35
SCARF1-202ENST00000348987 LCMT2O60294 686 aaKnown RBP17.22■□□□□ 0.35
SCARF1-202ENST00000348987 FMO6PO60774 539 aa17.22■□□□□ 0.35
SCARF1-202ENST00000348987 STX11O75558 287 aa17.22■□□□□ 0.35
SCARF1-202ENST00000348987 ECDO95905 644 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-202ENST00000348987 UCHL1P09936 223 aa17.22■□□□□ 0.35
SCARF1-202ENST00000348987 ZNF35P13682 527 aa17.22■□□□□ 0.35
SCARF1-202ENST00000348987 DDX6P26196 483 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCARF1-202ENST00000348987 MAT2AP31153 395 aaKnown RBP17.22■□□□□ 0.35
SCARF1-202ENST00000348987 LASP1Q14847 261 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms