RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 NOX1Q9Y5S8 564 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 HS3ST3A1Q9Y663 406 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 OR6C70A6NIJ9 312 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 TNFP01375 233 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 IGKV1D-16P01601 117 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 TFPIP10646 304 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 RRAS2P62070 204 aaPredicted RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 MRPS21P82921 87 aaKnown RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 CRYZQ08257 329 aaKnown RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 FAPQ12884 760 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 EFR3AQ14156 821 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 GPR176Q14439 515 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 FGFBP1Q14512 234 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 ARHGEF39Q8N4T4 335 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 OR4N2Q8NGD1 307 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 OR9A4Q8NGU2 314 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 GHSRQ92847 366 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 TRAF4Q9BUZ4 470 aaPredicted RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 S1PR5Q9H228 398 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 TCEAL2Q9H3H9 227 aaPredicted RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 KLHL1Q9NR64 748 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 ST6GALNAC2Q9UJ37 374 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 OR5K3A6NET4 321 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 SLC9B1P1A6NJY1 282 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 OR5K4A6NMS3 321 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 LANCL1O43813 399 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 PAHP00439 452 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 C1QBP02746 253 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 DRD1P21728 446 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 RABIFP47224 123 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 AGFG1P52594 562 aaKnown RBP13.39□□□□□ -0.27
TDP2-201ENST00000341060 HTR4Q13639 388 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 FAM53BQ14153 422 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 GGTLC2Q14390 218 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 ACSM3Q53FZ2 586 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 Q5BKY6 102 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 ULK3Q6PHR2 472 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 OOSP2Q86WS3 158 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 RFLNBQ8N5W9 214 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 POMGNT2Q8NAT1 580 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 TRMT10AQ8TBZ6 339 aaKnown RBP13.39□□□□□ -0.27
TDP2-201ENST00000341060 VSTM2LQ96N03 204 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 ERMAPQ96PL5 475 aaPredicted RBP13.39□□□□□ -0.27
TDP2-201ENST00000341060 NIPAL2Q9H841 368 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 FAM60AQ9NP50 221 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 MCUBQ9NWR8 336 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 MTCH2Q9Y6C9 303 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 THADAQ6YHU6 1953 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 INMT-MINDY4F8WBC2 141 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 TFP02787 698 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 RAB3BP20337 219 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 GZMKP49863 264 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 ACTA2P62736 377 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 ACTG2P63267 376 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 CCDC85BQ15834 202 aaPredicted RBP13.39□□□□□ -0.27
TDP2-201ENST00000341060 ZNF141Q15928 474 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 DEFB110Q30KQ9 67 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 SLC25A35Q3KQZ1 300 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 PYHIN1Q6K0P9 492 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 ZNF550Q7Z398 422 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 SYS1Q8N2H4 156 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 SDR9C7Q8NEX9 313 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 OR52E2Q8NGJ4 325 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 SMIM19Q96E16 107 aa13.39□□□□□ -0.27
TDP2-201ENST00000341060 RPRD1BQ9NQG5 326 aaKnown RBP13.39□□□□□ -0.27
TDP2-201ENST00000341060 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.39□□□□□ -0.27
TDP2-201ENST00000341060 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
TDP2-201ENST00000341060 COL6A3P12111 3177 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 TRAV1-2A0A0B4J238 106 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 NPIPB9F8W1W9 429 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 OGG1O15527 345 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 FZD7O75084 574 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 NDUFB2O95178 105 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 SERPINA3P01011 423 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 CELA2BP08218 269 aaPredicted RBP13.38□□□□□ -0.27
TDP2-201ENST00000341060 OR2T7P0C7T2 308 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 ST6GAL1P15907 406 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 HIST1H1CP16403 213 aaKnown RBP13.38□□□□□ -0.27
TDP2-201ENST00000341060 AHCYP23526 432 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 BTG1P62324 171 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 TNK1Q13470 666 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 ZSWIM7Q19AV6 140 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 PLA1AQ53H76 456 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 HACD4Q5VWC8 232 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 BICRALQ6AI39 1079 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 KIRREL2Q6UWL6 708 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 ZNF761Q86XN6 746 aaPredicted RBP13.38□□□□□ -0.27
TDP2-201ENST00000341060 OR2T27Q8NH04 317 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 RPLP0P6Q8NHW5 317 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 ZFAND1Q8TCF1 268 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 AKAP1Q92667 903 aaKnown RBP eCLIP13.38□□□□□ -0.27
TDP2-201ENST00000341060 RIT1Q92963 219 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 GFM1Q96RP9 751 aaKnown RBP13.38□□□□□ -0.27
TDP2-201ENST00000341060 CNN2Q99439 309 aaKnown RBP13.38□□□□□ -0.27
TDP2-201ENST00000341060 RBCK1Q9BYM8 510 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 ABCG5Q9H222 651 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms