RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 HDHD2Q9H0R4 259 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 CXorf36Q9H7Y0 433 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 NMNAT1Q9HAN9 279 aaPredicted RBP13.95□□□□□ -0.18
BRAT1-201ENST00000340611 FTSJ1Q9UET6 329 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 MAP4K5Q9Y4K4 846 aa13.95□□□□□ -0.18
BRAT1-201ENST00000340611 A0A0G2JPF8 293 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 FAM221BA6H8Z2 402 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 HNRNPCL3B7ZW38 293 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 PROM1O43490 865 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SLC43A1O75387 559 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 CDC123O75794 336 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SIX6O95475 246 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 HNRNPCL4P0DMR1 293 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SCARB2Q14108 478 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 RBMS2Q15434 407 aaKnown RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 CCDC116Q8IYX3 515 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 FTMTQ8N4E7 242 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SYT14Q8NB59 555 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 TMEM52Q8NDY8 209 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 NXPE2Q96DL1 559 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SEC14L4Q9UDX3 406 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SSR3Q9UNL2 185 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 LSM2Q9Y333 95 aaKnown RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 A0A0A6YYC8 382 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 ZAR1LA6NP61 321 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 I3L1I5 382 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 RDH16O75452 317 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 ANXA3P12429 323 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 RHCEP18577 417 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 KCNJ3P48549 501 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 MANFP55145 182 aaKnown RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 MAT1AQ00266 395 aaKnown RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 ERV3-1Q14264 604 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 HEPACAMQ14CZ8 416 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 KIF26BQ2KJY2 2108 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 TMEM35AQ53FP2 167 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 RNF44Q7L0R7 432 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 COL26A1Q96A83 441 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 MS4A3Q96HJ5 214 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SPRTNQ9H040 489 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 GLS2Q9UI32 602 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 STUB1Q9UNE7 303 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 ASPMQ8IZT6 3477 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 ZNF318Q5VUA4 2279 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 LY6G6EA0A0G2JKS1 128 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 LILRA5A6NI73 299 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 KRBOX1C9JBD0 128 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 LDB3O75112 727 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 GLB1P16278 677 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 STOMP27105 288 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 CD1CP29017 333 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 HFEQ30201 348 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 DDI2Q5TDH0 399 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 CNIH2Q6PI25 160 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 C5orf46Q6UWT4 87 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 OLIG3Q7RTU3 272 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 LSRQ86X29 649 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 GAL3ST3Q96A11 431 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 CNRIP1Q96F85 164 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-201ENST00000340611 LRRC46Q96FV0 321 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 ZNF285Q96NJ3 590 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 WDFY2Q96P53 400 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SLC35A5Q9BS91 424 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 CHIAQ9BZP6 476 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 ZSCAN32Q9NX65 697 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 CLCA2Q9UQC9 943 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 U3KQA8 63 aa13.94□□□□□ -0.18
BRAT1-201ENST00000340611 SH3D21A4FU49 640 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 CAPZA1P52907 286 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 ARFIP1P53367 373 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 MVDP53602 400 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 SERTAD2Q14140 314 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 BMP8AQ7Z5Y6 402 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 ZC3H10Q96K80 434 aaKnown RBP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 CMSS1Q9BQ75 279 aaKnown RBP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 CRB3Q9BUF7 120 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 BHLHE41Q9C0J9 482 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 CAPN10Q9HC96 672 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 LYARQ9NX58 379 aaKnown RBP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 SLCO1C1Q9NYB5 712 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 TRBV4-1A0A0J9YWV2 114 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 HYKKA2RU49 373 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 H3BN98 237 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 GNB5O14775 395 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 NUDT21O43809 227 aaKnown RBP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 GDF9O60383 454 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 B4GALT2O60909 372 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 EIF3GO75821 320 aaKnown RBP eCLIP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 SDC2P34741 201 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 C21orf58P58505 322 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 MRM1Q6IN84 353 aaKnown RBP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 LNX2Q8N448 690 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 CAMKVQ8NCB2 501 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 DUSP18Q8NEJ0 188 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 YIPF4Q9BSR8 244 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 C1GALT1Q9NS00 363 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 RXFP3Q9NSD7 469 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 TXNL4BQ9NX01 149 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms