RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 CDH10Q9Y6N8 788 aa11.07□□□□□ -0.64
USP1-201ENST00000339950 NOTCH4Q99466 2003 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 TMEM72A0PK05 275 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 L7N2F9 121 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 PRICKLE3O43900 615 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 SLC25A12O75746 678 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 MSL3P1P0C860 447 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 PSMA3P25788 255 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 NTSR1P30989 418 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 GNALP38405 381 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 AGBL4Q5VU57 503 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 ABHD13Q7L211 337 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 GDPD1Q8N9F7 314 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 ST6GAL2Q96JF0 529 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 WDR92Q96MX6 357 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 TOX2Q96NM4 488 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 MS4A4EQ96PG1 132 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 SDF2Q99470 211 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 TSPAN10Q9H1Z9 355 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 DPAGT1Q9H3H5 408 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 PAK6Q9NQU5 681 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 PLEKHB1Q9UF11 243 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 LIPT1Q9Y234 373 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 TMEM5Q9Y2B1 443 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 EYSQ5T1H1 3165 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 A0A1B0GWA3 101 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 SHISA3A0PJX4 238 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 UBE2QL1A1L167 161 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 MCIDASD6RGH6 385 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 RNF13O43567 381 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 TBX6O95947 436 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 GABRB1P18505 474 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 AQP2P41181 271 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 GDI2P50395 445 aaKnown RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 EEF1A2Q05639 463 aaKnown RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 TOMM20Q15388 145 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 HSD17B12Q53GQ0 312 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 ZNF322Q6U7Q0 402 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 FTMTQ8N4E7 242 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 FAM26EQ8N5C1 309 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 RFLNBQ8N5W9 214 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 ZNF707Q96C28 371 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 SDHCQ99643 169 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 SLITRK2Q9H156 845 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 POLEQ07864 2286 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 S100A6P06703 90 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 UGT2B7P16662 529 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 HOXB9P17482 250 aaPredicted RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 LBX1P52954 281 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 CTXN1P60606 82 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 SNRPGP62308 76 aaKnown RBP11.06□□□□□ -0.64
USP1-201ENST00000339950 GPR176Q14439 515 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 BEX5Q5H9J7 111 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 TMEM240Q5SV17 173 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 JAGN1Q8N5M9 183 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 POMGNT2Q8NAT1 580 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 LMX1AQ8TE12 382 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 NSMAFQ92636 917 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 Q96M85 177 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 DGAT2Q96PD7 388 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 NKX2-4Q9H2Z4 354 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 DIABLOQ9NR28 239 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 LRIT1Q9P2V4 623 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 V9GYH0 126 aa11.06□□□□□ -0.64
USP1-201ENST00000339950 SPTA1P02549 2419 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 A0A1W2PPV9 198 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 C17orf51A8MQB3 221 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 H3BUI4 141 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ARPC1BO15143 372 aaKnown RBP11.05□□□□□ -0.64
USP1-201ENST00000339950 LILRB5O75023 590 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 FZD7O75084 574 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ALX3O95076 343 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 C5AR1P21730 350 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 GABRA5P31644 462 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 GPLD1P80108 840 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 STK11Q15831 433 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 C4orf46Q504U0 113 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 TMEM35AQ53FP2 167 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ZNF765Q7L2R6 523 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 SIAH3Q8IW03 269 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 FOXRED2Q8IWF2 684 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ABHD4Q8TB40 342 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 DVL3Q92997 716 aaPredicted RBP11.05□□□□□ -0.64
USP1-201ENST00000339950 MYADMQ96S97 322 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ZFYVE21Q9BQ24 234 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 SEC22CQ9BRL7 303 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 FKRPQ9H9S5 495 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ACOXLQ9NUZ1 547 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 DHCR7Q9UBM7 475 aaKnown RBP11.05□□□□□ -0.64
USP1-201ENST00000339950 COL4A6Q14031 1691 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 DCDC2BA2VCK2 349 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 PLA2G10O15496 165 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 LILRB3O75022 631 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 SPARCP09486 303 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 HHEXQ03014 270 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 GPR50Q13585 617 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 NKAIN2Q5VXU1 208 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 GALNTL5Q7Z4T8 443 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 LGALS14Q8TCE9 139 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 C5orf34Q96MH7 638 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms