RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GPN3Q9UHW5 284 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 CDX4O14627 284 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 FADS1O60427 444 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 CDK4P11802 303 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 RAB40BQ12829 278 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 SPHARQ15513 63 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 NXNL2Q5VZ03 156 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 GALNT6Q8NCL4 622 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 OIT3Q8WWZ8 545 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 RELTQ969Z4 430 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 OPALINQ96PE5 141 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 MND1Q9BWT6 205 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 RNF167Q9H6Y7 350 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 ETAA1Q9NY74 926 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 H2AFY2Q9P0M6 372 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 B3GALT1Q9Y5Z6 326 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 LOC100506127A0A0U1RQW1 187 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 MYL12BO14950 172 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 SLC22A1O15245 554 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 NOS3P29474 1203 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 SLC26A5P58743 744 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 ZNF362Q5T0B9 420 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 OR2G6Q5TZ20 316 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 C10orf53Q8N6V4 93 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 DUSP19Q8WTR2 217 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 RFKQ969G6 155 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 TP53INP1Q96A56 240 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 PCDHGB2Q9Y5G2 931 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 OR6C70A6NIJ9 312 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 MPDZO75970 2070 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 LCN1P31025 176 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 SLC1A3P43003 542 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 CLK1P49759 484 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 EGR4Q05215 589 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 FAM198BQ6UWH4 519 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 CMKLR1Q99788 373 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 PCNX3Q9H6A9 2034 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 CMC2Q9NRP2 79 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 MRPS18AQ9NVS2 196 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 FBXL4Q9UKA2 621 aa20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 PPIEQ9UNP9 301 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 PTRH2Q9Y3E5 179 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-203ENST00000339162 A0A1W2PQD3 144 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 MCIDASD6RGH6 385 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 M0R3G1 203 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 PPM1BO75688 479 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 CLUP10909 449 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 PNMTP11086 282 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 CD59P13987 128 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 RPS3AP61247 264 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 SSX1Q16384 188 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 KLHL12Q53G59 568 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 LHFPL3Q86UP9 236 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 TBC1D15Q8TC07 691 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 PTP4A1Q93096 173 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 MOGAT1Q96PD6 335 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 ERMAPQ96PL5 475 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 CHCHD6Q9BRQ6 235 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 ADAM18Q9Y3Q7 739 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 RALGAPA1Q6GYQ0 2036 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 MYL12AP19105 171 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 SLC6A6P31641 620 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 ATP6V1E1P36543 226 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 CD79BP40259 229 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 PROKR2Q8NFJ6 384 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 NUBPLQ8TB37 319 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 DTNBP1Q96EV8 351 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 OR51V1Q9H2C8 321 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 FGF20Q9NP95 211 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 TIMMDC1Q9NPL8 285 aa20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 C19orf25Q9UFG5 118 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-203ENST00000339162 UMODP07911 640 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 HTR1FP30939 366 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 SLC16A1P53985 500 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 CRMP1Q14194 572 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 BICRALQ6AI39 1079 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 SLC37A3Q8NCC5 494 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 OR51G2Q8NGK0 314 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 KTI12Q96EK9 354 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 BCL7BQ9BQE9 202 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 WDR54Q9H977 334 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 GALNT9Q9HCQ5 603 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 CACNA1HO95180 2353 aa20.44■□□□□ 0.86
PDLIM2-203ENST00000339162 KLF7O75840 302 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 OR7A10O76100 309 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 NDUFB2O95178 105 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 GYPBP06028 91 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 CELA2AP08217 269 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 RPL4P36578 427 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 C3orf38Q5JPI3 329 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 NIPAL3Q6P499 406 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 GHDCQ8N2G8 530 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 SIRT6Q8N6T7 355 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 GATAD2BQ8WXI9 593 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 CENPOQ9BU64 300 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 IER3IP1Q9Y5U9 82 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 PNMA8CA0A1B0GUJ8 204 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 PRR23D1E9PI22 279 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 BLOC1S5-TXNDC5H3BN57 136 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 CCRL2O00421 344 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms