RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 DHDDSQ86SQ9 333 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 COMTD1Q86VU5 262 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 TMEM200AQ86VY9 491 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 NFKBIDQ8NI38 313 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 BBS10Q8TAM1 723 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 TSPEARQ8WU66 669 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 SLC25A43Q8WUT9 341 aaPredicted RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 ZNF317Q96PQ6 595 aaPredicted RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 GPATCH1Q9BRR8 931 aaKnown RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 SPATA9Q9BWV2 254 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 OR11A1Q9GZK7 315 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 SERINC1Q9NRX5 453 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.6□□□□□ -0.23
PRKN-201ENST00000338468 NDUFAF1Q9Y375 327 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 EMC9Q9Y3B6 208 aa13.6□□□□□ -0.23
PRKN-201ENST00000338468 TMED7-TICAM2A0A0A6YYA0 188 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 TMEM72A0PK05 275 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 TMEM247A6NEH6 219 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 PLGP00747 810 aaPredicted RBP13.59□□□□□ -0.23
PRKN-201ENST00000338468 HOXB4P17483 251 aaPredicted RBP13.59□□□□□ -0.23
PRKN-201ENST00000338468 TACR3P29371 465 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 MDH1P40925 334 aaKnown RBP13.59□□□□□ -0.23
PRKN-201ENST00000338468 SLC1A3P43003 542 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 CTBP2P56545 445 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 CDK6Q00534 326 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 LARS2Q15031 903 aaKnown RBP13.59□□□□□ -0.23
PRKN-201ENST00000338468 RNPS1Q15287 305 aaKnown RBP13.59□□□□□ -0.23
PRKN-201ENST00000338468 C22orf34Q6ZV56 151 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 NUFIP2Q7Z417 695 aaKnown RBP13.59□□□□□ -0.23
PRKN-201ENST00000338468 TUSC5Q8IXB3 177 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 ZNF440Q8IYI8 595 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 DNAJA3Q96EY1 480 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 ANKRD27Q96NW4 1050 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 CGREF1Q99674 301 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 TMEM38AQ9H6F2 299 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 SAR1AQ9NR31 198 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 RASSF1Q9NS23 344 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 ELOVL5Q9NYP7 299 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 KLHL13Q9P2N7 655 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 IFT52Q9Y366 437 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 TMED7Q9Y3B3 224 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 TESMINQ9Y4I5 508 aa13.59□□□□□ -0.23
PRKN-201ENST00000338468 ZC3H12DA2A288 527 aaKnown RBP13.58□□□□□ -0.24
PRKN-201ENST00000338468 SH3D21A4FU49 640 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 ANGPT2O15123 496 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 FRS3O43559 492 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 CYTIPO60759 359 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 PRKD3O94806 890 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 FESP07332 822 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 POU2F1P14859 743 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 ETS2P15036 469 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 CCNA2P20248 432 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 UGT2B10P36537 528 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 HTR3AP46098 478 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 POLR2HP52434 150 aaKnown RBP13.58□□□□□ -0.24
PRKN-201ENST00000338468 ZNF311Q5JNZ3 666 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 GTF2IRD2BQ6EKJ0 949 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 SERPINA11Q86U17 422 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 GTF2IRD2Q86UP8 949 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 PTOV1Q86YD1 416 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 SLC43A2Q8N370 569 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 NRGNQ92686 78 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 REXO5Q96IC2 774 aaKnown RBP13.58□□□□□ -0.24
PRKN-201ENST00000338468 WFIKKN1Q96NZ8 548 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 PSD2Q9BQI7 771 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 BCO1Q9HAY6 547 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 GP6Q9HCN6 339 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 ZNF232Q9UNY5 417 aa13.58□□□□□ -0.24
PRKN-201ENST00000338468 SPIN1Q9Y657 262 aaPredicted RBP13.58□□□□□ -0.24
PRKN-201ENST00000338468 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 ZNF814B7Z6K7 855 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 C5orf58C9J3I9 102 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 SULT2B1O00204 365 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 ZNF208O43345 1280 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 TPST1O60507 370 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 GCM2O75603 506 aaPredicted RBP13.57□□□□□ -0.24
PRKN-201ENST00000338468 PMS2P2O95744 297 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 YES1P07947 543 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 TFPIP10646 304 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 IMPDH2P12268 514 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 EDNRAP25101 427 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 CLK1P49759 484 aaKnown RBP13.57□□□□□ -0.24
PRKN-201ENST00000338468 MTPNP58546 118 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 HOXC5Q00444 222 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 KLF10Q13118 480 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 NFYCQ13952 458 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 SCARB2Q14108 478 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
PRKN-201ENST00000338468 ZSWIM7Q19AV6 140 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 EXOC3L2Q2M3D2 409 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 ABLIM2Q6H8Q1 611 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 ZNF550Q7Z398 422 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 C10orf82Q8WW14 230 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 ZNF300Q96RE9 604 aaPredicted RBP13.57□□□□□ -0.24
PRKN-201ENST00000338468 SLC39A3Q9BRY0 314 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 C12orf49Q9H741 205 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms