RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ZNF620Q6ZNG0 422 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 LINC00696Q6ZRV3 163 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ADGRG3Q86Y34 549 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GPALPP1Q8IXQ4 340 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ENTHD1Q8IYW4 607 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR13C2Q8NGS9 318 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TEX47Q8TBZ9 253 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ST8SIA1Q92185 356 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 NTNG2Q96CW9 530 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SGTBQ96EQ0 304 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC19A3Q9BZV2 496 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MED17Q9NVC6 651 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ABI3Q9P2A4 366 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 IL20RAQ9UHF4 553 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RNF6Q9Y252 685 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MYRFQ9Y2G1 1151 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TMED7Q9Y3B3 224 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ANKRD33BA6NCL7 494 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SMNDC1O75940 238 aaKnown RBP eCLIP13.38□□□□□ -0.272e-22■□□□□ 9.5
CDK5RAP3-201ENST00000338399 CH25HO95992 272 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CD96P40200 585 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GIPRP48546 466 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MASP1P48740 699 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF41P51814 821 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CDC42P60953 191 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CLEC12AQ5QGZ9 265 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLX4IPQ5VYV7 408 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PLCZ1Q86YW0 608 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FADS6Q8N9I5 356 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FBLIM1Q8WUP2 373 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FGF11Q92914 225 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 JSRP1Q96MG2 331 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TSSK6Q9BXA6 273 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 HHATLQ9HCP6 504 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SACM1LQ9NTJ5 587 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TBC1D23Q9NUY8 699 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 IL20Q9NYY1 176 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 LRFN1Q9P244 771 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 WASF3Q9UPY6 502 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CDH10Q9Y6N8 788 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SPTBN2O15020 2390 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CNTRLQ7Z7A1 2325 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TRAV27A0A087WT01 109 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TMEM72A0PK05 275 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SHISA8B8ZZ34 492 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SNPHO15079 494 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SUSD5O60279 629 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 WDPCPO95876 746 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TCEA1P23193 301 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CASRP41180 1078 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 HTR3AP46098 478 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DNASE1L1P49184 302 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FXYD6P3P58550 94 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CDK5Q00535 292 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TUBA3CQ13748 450 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 C6orf141Q5SZD1 244 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SPINK14Q6IE38 97 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 LAIR2Q6ISS4 152 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TUBA3EQ6PEY2 450 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OAFQ86UD1 273 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DEPDC4Q8N2C3 294 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 LRRC17Q8N6Y2 441 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CLDN22Q8N7P3 220 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR51A7Q8NH64 312 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 KCNE4Q8WWG9 221 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OSTF1Q92882 214 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SAMD8Q96LT4 415 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 UTP23Q9BRU9 249 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ADNPQ9H2P0 1102 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR52D1Q9H346 318 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF696Q9H7X3 374 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PTGES2Q9H7Z7 377 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 IMPAD1Q9NX62 359 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF226Q9NYT6 803 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PLA2G3Q9NZ20 509 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ASPMQ8IZT6 3477 aa13.38□□□□□ -0.27
CDK5RAP3-201ENST00000338399 A0A0G2JMM0 328 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 A0A1W2PPB8 328 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 A0A1W2PRS3 328 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZC3H12DA2A288 527 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF891A8MT65 544 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 KIR3DP1A8MWS1 328 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PTP4A3O75365 173 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC25A12O75746 678 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR7A10O76100 309 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SNX4O95219 450 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CDC20Q12834 499 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FOXF1Q12946 379 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PLPPR5Q32ZL2 321 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 BROXQ5VW32 411 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 C12orf73Q69YU5 71 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC27A4Q6P1M0 643 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TMEM154Q6P9G4 183 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CASP12Q6UXS9 341 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC46A3Q7Z3Q1 461 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms