RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TRAPPC13A5PLN9 417 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 CPSF4LA6NMK7 179 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 A8MVM7 634 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 TMEM229AB2RXF0 380 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 ADAMDEC1O15204 470 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 LRRTM2O43300 516 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 TPST2O60704 377 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 SYNGR4O95473 234 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 ITGA2P17301 1181 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 TNFRSF1BP20333 461 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 HTR2AP28223 471 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 EIF1AXP47813 144 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 SUCLG1P53597 346 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 PER3P56645 1201 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 CLDN15P56746 228 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 TAS2R41P59536 307 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 MS4A2Q01362 244 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 C4orf17Q53FE4 359 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 ALG10BQ5I7T1 473 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 SWT1Q5T5J6 900 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 HBMQ6B0K9 141 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 CYP2R1Q6VVX0 501 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 B3GNT6Q6ZMB0 384 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 DEF8Q6ZN54 512 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 VTCN1Q7Z7D3 282 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 ATG4DQ86TL0 474 aaPredicted RBP10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 CYP4Z1Q86W10 505 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 LACC1Q8IV20 430 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 OR4D11Q8NGI4 311 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 SLC38A4Q969I6 547 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 C3orf49Q96BT1 292 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 CCDC124Q96CT7 223 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 OR5B2Q96R09 309 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 TRIB1Q96RU8 372 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 TUBA1CQ9BQE3 449 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 POTEKPQ9BYX7 375 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 PRRG4Q9BZD6 226 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 SLC5A6Q9Y289 635 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 MEMO1Q9Y316 297 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 HDGFL3Q9Y3E1 203 aa10.72□□□□□ -0.69
SPTLC1-202ENST00000337841 A0A0B4J2E0 115 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 A0A1B0GX12 115 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 TMEM72A0PK05 275 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 CD8B2A6NJW9 211 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 TNFSF11O14788 317 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 OR5F1O95221 314 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 THRBP10828 461 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 CDH12P55289 794 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 CSNK2A1P68400 391 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 NPTX1Q15818 432 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 SYT14P1Q58G82 188 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 NSUN5P2Q63ZY6 315 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 GTF2IRD2BQ6EKJ0 949 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 LCN8Q6JVE9 175 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 C5orf46Q6UWT4 87 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 C3P1Q6ZMU1 363 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 TMPPEQ6ZT21 453 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 P4HA3Q7Z4N8 544 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 GTF2IRD2Q86UP8 949 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 GGNQ86UU5 652 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 FJX1Q86VR8 437 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 OR10D3Q8NH80 312 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 STK35Q8TDR2 534 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 ADAMTS16Q8TE57 1224 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 WNT2BQ93097 391 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 MPP4Q96JB8 637 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 UCN2Q96RP3 112 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 TM9SF2Q99805 663 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 FNDC11Q9BVV2 318 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 AMBRA1Q9C0C7 1298 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 RIMS3Q9UJD0 308 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 MCTS1Q9ULC4 181 aaKnown RBP10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 TRAPPC4Q9Y296 219 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 ENPP4Q9Y6X5 453 aa10.71□□□□□ -0.69
SPTLC1-202ENST00000337841 BOD1L1Q8NFC6 3051 aa10.71□□□□□ -0.7
SPTLC1-202ENST00000337841 A0A087WUJ7 227 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 AQP12BA6NM10 295 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 CLCA1A8K7I4 914 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 H0YC42 278 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 PYCARD-AS1I3L0S3 204 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 SULT2B1O00204 365 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ACOT8O14734 319 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 CHP2O43745 196 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 CXCL13O43927 109 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 CIB2O75838 187 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 IL2RAP01589 272 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 SMSP52788 366 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 TPD52P55327 224 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 OR2B6P58173 313 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 RAC3P60763 192 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 CHRNB3Q05901 458 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 PMPCAQ10713 525 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ST3GAL3Q11203 375 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 PIN1Q13526 163 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 FLOT2Q14254 428 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ACSF3Q4G176 576 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 FAM98BQ52LJ0 330 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 TTC33Q6PID6 262 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 RPTNQ6XPR3 784 aa10.7□□□□□ -0.7
SPTLC1-202ENST00000337841 ASRGL1Q7L266 308 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms