RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 GLS2Q9UI32 602 aa8.6□□□□□ -1.03
FNDC3B-201ENST00000336824 TRBV2A0A0J9YWF9 115 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 WISP3O95389 354 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 APLNRP35414 380 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 SUMO3P55854 103 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 SPHARQ15513 63 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 PGGHGQ32M88 737 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CNEP1R1Q8N9A8 125 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 C11orf24Q96F05 449 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 SLC41A2Q96JW4 573 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 NRSN2Q9GZP1 204 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CHMP1AQ9HD42 196 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 MED11Q9P086 117 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 RNF6Q9Y252 685 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CNOT1A5YKK6 2376 aaKnown RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 B4E171 279 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 PRAMEF10O60809 474 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 GADD45AP24522 165 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 TSPAN7P41732 249 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 IL10RAQ13651 578 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 QPRTQ15274 297 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 COL28A1Q2UY09 1125 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF101Q8IZC7 436 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 IQCF1Q8N6M8 205 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF420Q8TAQ5 688 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 VWCEQ96DN2 955 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 INTS14Q96SY0 518 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 SNTG1Q9NSN8 517 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 RLIMQ9NVW2 624 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 FANCMQ8IYD8 2048 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 A0A1W2PRQ8 180 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 EML2O95834 649 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 FCGR2AP12318 317 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 SLC1A3P43003 542 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CHAF1BQ13112 559 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 DEFB109BQ30KR1 87 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 FAM69AQ5T7M9 428 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 HBMQ6B0K9 141 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 JAGN1Q8N5M9 183 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 OR6T1Q8NGN1 323 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF566Q969W8 418 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CDH20Q9HBT6 801 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CHRNA9Q9UGM1 479 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 TRBV4-1A0A0J9YWV2 114 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 UBE2QL1A1L167 161 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 OR2J2O76002 312 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 MAN2A2P49641 1150 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 POU3F1Q03052 451 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 LRFN4Q6PJG9 635 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 RASSF6Q6ZTQ3 369 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 ARL5BQ96KC2 179 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 IL20RAQ9UHF4 553 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 MBD1Q9UIS9 605 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 FKBP7Q9Y680 259 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 TRAV27A0A087WT01 109 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 ERGP11308 486 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 PPP2R2BQ00005 443 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 PWWP2BQ6NUJ5 590 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 PIWIL3Q7Z3Z3 882 aaKnown RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 VN1R4Q7Z5H5 301 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 NDUFAF4Q9P032 175 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 GPR52Q9Y2T5 361 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 A0A1W2PPV9 198 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 J3KTA2 159 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 WDPCPO95876 746 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 PDGFBP01127 241 aaPredicted RBP8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 ZNF883P0CG24 379 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 ERVK-25P63136 954 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CEP78Q5JTW2 689 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 GDF7Q7Z4P5 450 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 CPOQ8IVL8 374 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 BORCS5Q969J3 196 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 TMEM203Q969S6 136 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 SLC25A37Q9NYZ2 338 aa8.59□□□□□ -1.03
FNDC3B-201ENST00000336824 LINC01387J3KSC0 135 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 ZNF806P0C7X5 589 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 CELP19835 753 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 CXCR4P61073 352 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 GLT8D1Q68CQ7 371 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 MS4A15Q8N5U1 240 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 TMEM102Q8N9M5 508 aaPredicted RBP8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 NKD1Q969G9 470 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 SPACA9Q96E40 222 aaPredicted RBP8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 FAM60AQ9NP50 221 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 LHX9Q9NQ69 397 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 ABCB10Q9NRK6 738 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 PTTG2Q9NZH5 202 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 MDC1Q14676 2089 aaKnown RBP8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 CLCA1A8K7I4 914 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 KDM4BO94953 1096 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 GALNSP34059 522 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 HLCSP50747 726 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 CDH15P55291 814 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 PCBP4P57723 403 aaKnown RBP8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 RAB40BQ12829 278 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 ZNF628Q5EBL2 1059 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 LRRN1Q6UXK5 716 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 DPY19L2P2Q6ZN68 376 aa8.58□□□□□ -1.04
FNDC3B-201ENST00000336824 KRT74Q7RTS7 529 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms