RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ENAMQ9NRM1 1142 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 OR10H1Q9Y4A9 318 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 PRAMEF2O60811 474 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 SOX30O94993 753 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 MLLT3P42568 568 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-201ENST00000334859 HCCSP53701 268 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 MAZP56270 477 aaKnown RBP16.29■□□□□ 0.2
LRCH3-201ENST00000334859 SKP1P63208 163 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 POU4F2Q12837 409 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 FHL1Q13642 323 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 FGFBP1Q14512 234 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 TRAM1Q15629 374 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 PRR23CQ6ZRP0 262 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 ZNF550Q7Z398 422 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 LRRC28Q86X40 367 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-201ENST00000334859 GHDCQ8N2G8 530 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 ARHGEF39Q8N4T4 335 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 LSMEM1Q8N8F7 131 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 OR13C5Q8NGS8 318 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 ABHD4Q8TB40 342 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 DGAT2Q96PD7 388 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 FYTTD1Q96QD9 318 aaKnown RBP16.29■□□□□ 0.2
LRCH3-201ENST00000334859 MKKSQ9NPJ1 570 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-201ENST00000334859 SLCO1B1Q9Y6L6 691 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 A0A1W2PRG6 482 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 LRRN3E7EW58 273 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 HIST1H1CP16403 213 aaKnown RBP16.29■□□□□ 0.2
LRCH3-201ENST00000334859 CD53P19397 219 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 NAA10P41227 235 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-201ENST00000334859 CCINQ13939 588 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 TP53I3Q53FA7 332 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 Q6ZS52 159 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 SLC2A12Q8TD20 617 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 TP53INP1Q96A56 240 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 LRRC61Q9BV99 259 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 LRRN3Q9H3W5 708 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 TRPV5Q9NQA5 729 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 PRTFDC1Q9NRG1 225 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 ADAM18Q9Y3Q7 739 aa16.29■□□□□ 0.2
LRCH3-201ENST00000334859 PRUNE2Q8WUY3 3088 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 NDUFB2O95178 105 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 EIF4EP06730 217 aaKnown RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 MAOAP21397 527 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 RPL4P36578 427 aaKnown RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 CCR5P51681 352 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 BTG2P78543 158 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 SF3A2Q15428 464 aaKnown RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 PRTGQ2VWP7 1150 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 GXYLT1Q4G148 440 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 PARGQ86W56 976 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 LRRC17Q8N6Y2 441 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 OR4M1Q8NGD0 313 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 GHSRQ92847 366 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 ZC3HAV1LQ96H79 300 aaKnown RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 PGLYRP3Q96LB9 341 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 G6PC3Q9BUM1 346 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 SYNDIG1Q9H7V2 258 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 HAO2Q9NYQ3 351 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 ERVK-19Q9WJR5 959 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 A0A1B0GVC2 190 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 A6NIN4 97 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 MCIDASD6RGH6 385 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 RGS13O14921 159 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 MAGEB4O15481 346 aaPredicted RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 CTNSO60931 367 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 CSTAP01040 98 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 LTBRP36941 435 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 ZNF141Q15928 474 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 ACSM3Q53FZ2 586 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 CCDC92Q53HC0 331 aaPredicted RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 PAMR1Q6UXH9 720 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 UPRTQ96BW1 309 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 KCTD12Q96CX2 325 aaKnown RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 SGTBQ96EQ0 304 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 CNN2Q99439 309 aaKnown RBP16.28■□□□□ 0.2
LRCH3-201ENST00000334859 KCNJ15Q99712 375 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 CYSLTR2Q9NS75 346 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 LRIT1Q9P2V4 623 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 CHRNA9Q9UGM1 479 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 IER3IP1Q9Y5U9 82 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 ALG5Q9Y673 324 aa16.28■□□□□ 0.2
LRCH3-201ENST00000334859 FAM172BPA6NC97 362 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 CLDN4O14493 209 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 FOXS1O43638 330 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 IFNA16P05015 189 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 THBS2P35442 1172 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 BLKP51451 505 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 GPR143P51810 404 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 ATP12AP54707 1039 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 NRG3P56975 720 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 C16orf52Q8NHV5 167 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 MAP3K3Q99759 626 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 PAQR5Q9NXK6 330 aaPredicted RBP16.27■□□□□ 0.2
LRCH3-201ENST00000334859 BOLA1Q9Y3E2 137 aa16.27■□□□□ 0.2
LRCH3-201ENST00000334859 A0A1W2PPK0 400 aa16.26■□□□□ 0.19
LRCH3-201ENST00000334859 SERPINI2O75830 405 aa16.26■□□□□ 0.19
LRCH3-201ENST00000334859 PAHP00439 452 aa16.26■□□□□ 0.19
LRCH3-201ENST00000334859 TFP02787 698 aa16.26■□□□□ 0.19
LRCH3-201ENST00000334859 CT45A8P0DMV1 189 aa16.26■□□□□ 0.19
LRCH3-201ENST00000334859 CT45A9P0DMV2 189 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms