RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 SLX1AQ9BQ83 275 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 ANKRD19PQ9H560 264 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 AGPAT4Q9NRZ5 378 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 ASF1BQ9NVP2 202 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 SELENONQ9NZV5 590 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 DNAJB9Q9UBS3 223 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 LYVE1Q9Y5Y7 322 aa13.65□□□□□ -0.22
CMC1-201ENST00000334841 EPG5Q9HCE0 2579 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 A0A1B0GVC2 190 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 ZC3H12DA2A288 527 aaKnown RBP13.64□□□□□ -0.23
CMC1-201ENST00000334841 H0YHG0 523 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 CLOCKO15516 846 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 HCN1O60741 890 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 GADD45GO95257 159 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 FCGR1AP12314 374 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 CHMP24386 653 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 CXCR1P25024 350 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 FASP25445 335 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 IFNA8P32881 189 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 LIMS1P48059 325 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 IST1P53990 364 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 UGT2B15P54855 530 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 LSM11P83369 360 aaKnown RBP eCLIP13.64□□□□□ -0.23
CMC1-201ENST00000334841 EGR4Q05215 589 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 PPP1R8Q12972 351 aaKnown RBP13.64□□□□□ -0.23
CMC1-201ENST00000334841 SEC23BQ15437 767 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 NHSL2Q5HYW2 709 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 GGNQ86UU5 652 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 P3H2Q8IVL5 708 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 LSM14AQ8ND56 463 aaKnown RBP13.64□□□□□ -0.23
CMC1-201ENST00000334841 ATP6V1C2Q8NEY4 427 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 OR4C15Q8NGM1 316 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 OR52J3Q8NH60 311 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 SLC7A13Q8TCU3 470 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 RELTQ969Z4 430 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 MPP4Q96JB8 637 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 PKP2Q99959 881 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 LDAHQ9H6V9 325 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 REEP1Q9H902 201 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 NTN4Q9HB63 628 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 TNFRSF10DQ9UBN6 386 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 U3KQV3 271 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 KMT2BQ9UMN6 2715 aaPredicted RBP13.64□□□□□ -0.23
CMC1-201ENST00000334841 CNTRLQ7Z7A1 2325 aa13.64□□□□□ -0.23
CMC1-201ENST00000334841 TTLL8A6PVC2 850 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 H0Y3Z8 333 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 ZNHIT1O43257 154 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 ZNF208O43345 1280 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 PIP5K1CO60331 668 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 NPIPB7O75200 414 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 LDLRP01130 860 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 OPN1LWP04000 364 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 BMP7P18075 431 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 POU3F2P20265 443 aaPredicted RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 SFTPDP35247 375 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 RBM34P42696 430 aaKnown RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 STARP49675 285 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 LHX2P50458 406 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 CLDN20P56880 219 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 RAC1P63000 192 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 CRYZQ08257 329 aaKnown RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 C19orf57Q0VDD7 668 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 RCN1Q15293 331 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 EXOC3L2Q2M3D2 409 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.63□□□□□ -0.23
CMC1-201ENST00000334841 SYT14P1Q58G82 188 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 VASNQ6EMK4 673 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 PODNL1Q6PEZ8 512 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 FGD2Q7Z6J4 655 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 AMIGO2Q86SJ2 522 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 CHERPQ8IWX8 916 aaKnown RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 SLC25A43Q8WUT9 341 aaPredicted RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 TMEM239Q8WW34 195 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 SMPDL3BQ92485 455 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 TMEM43Q9BTV4 400 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 EXO5Q9H790 373 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 SERINC1Q9NRX5 453 aa13.63□□□□□ -0.23
CMC1-201ENST00000334841 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 SPIN1Q9Y657 262 aaPredicted RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 TLN1Q9Y490 2541 aaKnown RBP13.63□□□□□ -0.23
CMC1-201ENST00000334841 A0A087WUU8 490 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 H0YC42 278 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 LINC01387J3KSC0 135 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 TNFRSF11BO00300 401 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 KPNA4O00629 521 aaPredicted RBP13.62□□□□□ -0.23
CMC1-201ENST00000334841 AQP7O14520 342 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 ACTL6AO96019 429 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 ZNF708P17019 499 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 GCKP35557 465 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 HMGA2P52926 109 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 MLLT10P55197 1068 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 TPD52P55327 224 aaPredicted RBP13.62□□□□□ -0.23
CMC1-201ENST00000334841 CLDN18P56856 261 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 SMIM11AP58511 58 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 LAPTM4AQ15012 233 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 C3AR1Q16581 482 aa13.62□□□□□ -0.23
CMC1-201ENST00000334841 CTU2Q2VPK5 515 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms