RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 FCGR2AP12318 317 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 EIF1AXP47813 144 aaKnown RBP18.46■□□□□ 0.55
MRPL40-201ENST00000333130 MAP2K6P52564 334 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 NUP107P57740 925 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 SRSF1Q07955 248 aaKnown RBP eCLIP18.46■□□□□ 0.55
MRPL40-201ENST00000333130 RIPPLY2Q5TAB7 128 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 YTHDF3Q7Z739 585 aaKnown RBP18.46■□□□□ 0.55
MRPL40-201ENST00000333130 MRGPRGQ86SM5 289 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 RANBP3LQ86VV4 465 aaPredicted RBP18.46■□□□□ 0.55
MRPL40-201ENST00000333130 CADM2Q8N3J6 435 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 ATP6V1C2Q8NEY4 427 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 OR2V1Q8NHB1 315 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 ZFP3Q96NJ6 502 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 TESQ9UGI8 421 aaKnown RBP18.46■□□□□ 0.55
MRPL40-201ENST00000333130 CHRNA9Q9UGM1 479 aa18.46■□□□□ 0.55
MRPL40-201ENST00000333130 MCTS1Q9ULC4 181 aaKnown RBP18.46■□□□□ 0.55
MRPL40-201ENST00000333130 SPTAN1Q13813 2472 aaKnown RBP18.46■□□□□ 0.55
MRPL40-201ENST00000333130 SLC22A20A6NK97 555 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 HSPB2A8KAH6 182 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 SYNGR4O95473 234 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 TIMP3P35625 211 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 CLDN15P56746 228 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 ADORA2A-AS1P86434 159 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 HSPB2Q16082 182 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 HBMQ6B0K9 141 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 LCN8Q6JVE9 175 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 PPP4R4Q6NUP7 873 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 GGNQ86UU5 652 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 RPRMLQ8N4K4 120 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 OR4D11Q8NGI4 311 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 LZICQ8WZA0 190 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 PROX1Q92786 737 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 WNT2BQ93097 391 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 UCN2Q96RP3 112 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 PRRG4Q9BZD6 226 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 MMADHCQ9H3L0 296 aaPredicted RBP18.45■□□□□ 0.54
MRPL40-201ENST00000333130 SELENONQ9NZV5 590 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 RPS6KA6Q9UK32 745 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 SLC9A8Q9Y2E8 581 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 ZNF175Q9Y473 711 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 KIAA1549Q9HCM3 1950 aa18.45■□□□□ 0.54
MRPL40-201ENST00000333130 MBD3L4A6NDZ8 208 aaPredicted RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MBD3L3A6NE82 208 aaPredicted RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 WIPF3A6NGB9 483 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MBD3L5A6NJ08 208 aaPredicted RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 M0R3H8 397 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 ACOT8O14734 319 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 ADAMDEC1O15204 470 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 FMO6PO60774 539 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MPDZO75970 2070 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 ATP6V1B2P21281 511 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 CXCR1P25024 350 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 HTR2AP28223 471 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 CHRNB4P30926 498 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 SUCLG1P53597 346 aaKnown RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MS4A2Q01362 244 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 CACNA1CQ13936 2221 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 NPTX1Q15818 432 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 TMEM176BQ3YBM2 270 aaPredicted RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 OR2A2Q6IF42 318 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MED12LQ86YW9 2145 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MARVELD2Q8N4S9 558 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 LSMEM1Q8N8F7 131 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 OR6T1Q8NGN1 323 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 OR10D3Q8NH80 312 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MBD3L2Q8NHZ7 208 aaPredicted RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 MCUR1Q96AQ8 359 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 SDCCAG3Q96C92 435 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 CCDC124Q96CT7 223 aaKnown RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 DDIT4LQ96D03 193 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 NSMCE2Q96MF7 247 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 ZNF559Q9BR84 538 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 TRIM2Q9C040 744 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 CTPS2Q9NRF8 586 aa18.44■□□□□ 0.54
MRPL40-201ENST00000333130 SAMD4AQ9UPU9 718 aaKnown RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 INTS1Q8N201 2190 aaKnown RBP18.44■□□□□ 0.54
MRPL40-201ENST00000333130 TNFSF11O14788 317 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 TPST2O60704 377 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 TFPIP10646 304 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 TACR3P29371 465 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 CLK1P49759 484 aaKnown RBP18.43■□□□□ 0.54
MRPL40-201ENST00000333130 CARD18P57730 90 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 HOXC5Q00444 222 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 TRAP1Q12931 704 aaKnown RBP18.43■□□□□ 0.54
MRPL40-201ENST00000333130 SYT14P1Q58G82 188 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 MTX3Q5HYI7 312 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 VTCN1Q7Z7D3 282 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 ADGRE4PQ86SQ3 457 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 CA5BP1Q8WTZ4 195 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 ITLN2Q8WWU7 325 aaPredicted RBP18.43■□□□□ 0.54
MRPL40-201ENST00000333130 CPNE4Q96A23 557 aaPredicted RBP18.43■□□□□ 0.54
MRPL40-201ENST00000333130 TPD52L3Q96J77 140 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 HSH2DQ96JZ2 352 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 ADAM19Q9H013 955 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 CLCF1Q9UBD9 225 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 SH3GLB1Q9Y371 365 aa18.43■□□□□ 0.54
MRPL40-201ENST00000333130 TMED7-TICAM2A0A0A6YYA0 188 aa18.42■□□□□ 0.54
MRPL40-201ENST00000333130 H0YC42 278 aa18.42■□□□□ 0.54
MRPL40-201ENST00000333130 ZNF682O95780 498 aa18.42■□□□□ 0.54
MRPL40-201ENST00000333130 OPN1LWP04000 364 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms