RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 KIAA1958Q8N8K9 716 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 PNLDC1Q8NA58 520 aaKnown RBP13.09□□□□□ -0.31
EPHB3-201ENST00000330394 STEAP2Q8NFT2 490 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 OR2T4Q8NH00 348 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 LRRC46Q96FV0 321 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 SMIM3Q9BZL3 60 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 ASB6Q9NWX5 421 aa13.09□□□□□ -0.31
EPHB3-201ENST00000330394 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ZNF888P0CJ79 500 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 TUBG1P23258 451 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 NDUFS1P28331 727 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 CRYBB2P43320 205 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 SLC6A12P48065 614 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 PER3P56645 1201 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 CLPPQ16740 277 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ARL14Q8N4G2 192 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 OR2A12Q8NGT7 310 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 C3orf49Q96BT1 292 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 TMEM168Q9H0V1 697 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 A0A0A6YYH2 397 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 A6NJ64 397 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 A8MVJ9 347 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 AIFM1O95831 613 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 SNRNP70P08621 437 aaKnown RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 UBBP0CG47 229 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 TDGQ13569 410 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 AANATQ16613 207 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 SPIN3Q5JUX0 258 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ZNF511Q8NB15 262 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 OR5T2Q8NGG2 359 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 UPRTQ96BW1 309 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 SLC38A3Q99624 504 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 SLC46A2Q9BY10 475 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ISG20L2Q9H9L3 353 aaKnown RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ZNF334Q9HCZ1 680 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ACSS1Q9NUB1 689 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 H7C1C5 153 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 SCO2O43819 266 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 F13BP05160 661 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 LCN6P62502 163 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 VAMP2P63027 116 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 RASGEF1BQ0VAM2 473 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 DHCR24Q15392 516 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 CLVS2Q5SYC1 327 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 FAM111BQ6SJ93 734 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 NLRC3Q7RTR2 1065 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 LRIG1Q96JA1 1093 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 SCGB3A2Q96PL1 93 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 PHB2Q99623 299 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 ZNF768Q9H5H4 540 aaKnown RBP13.08□□□□□ -0.32
EPHB3-201ENST00000330394 AUNIPQ9H7T9 357 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 LIN7BQ9HAP6 207 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 CAMK2AQ9UQM7 478 aa13.08□□□□□ -0.32
EPHB3-201ENST00000330394 MN1Q10571 1320 aaPredicted RBP13.07□□□□□ -0.32
EPHB3-201ENST00000330394 TGM5O43548 720 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
EPHB3-201ENST00000330394 ADH6P28332 368 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 CCR9P51686 369 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 FOXK2Q01167 660 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 TPBGQ13641 420 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 FAM74A1Q5RGS3 127 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 GLB1L2Q8IW92 636 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 SVBPQ8N300 66 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 BPIFB2Q8N4F0 458 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 OR52N1Q8NH53 320 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 TMEM106AQ96A25 262 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 MMABQ96EY8 250 aaPredicted RBP13.07□□□□□ -0.32
EPHB3-201ENST00000330394 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 AMDHD1Q96NU7 426 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 PFDN5Q99471 154 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 HCAR1Q9BXC0 346 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 SEMA4CQ9C0C4 833 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 IL21RQ9HBE5 538 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 MCCC2Q9HCC0 563 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 COPS7AQ9UBW8 275 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 ZNF443Q9Y2A4 671 aaPredicted RBP13.07□□□□□ -0.32
EPHB3-201ENST00000330394 RGS13O14921 159 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 LATS1O95835 1130 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 CSF1P09603 554 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 H2BFMP0C1H6 154 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 RAB6AP20340 208 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 RAD52P43351 418 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
EPHB3-201ENST00000330394 MAPK14Q16539 360 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 TCEAL5Q5H9L2 206 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 MPP7Q5T2T1 576 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 CCDC71Q8IV32 467 aaPredicted RBP13.07□□□□□ -0.32
EPHB3-201ENST00000330394 RDH10Q8IZV5 341 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 OR51D1Q8NGF3 324 aa13.07□□□□□ -0.32
EPHB3-201ENST00000330394 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms