RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 C1QTNF6Q9BXI9 259 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 TUBB1Q9H4B7 451 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 REEP4Q9H6H4 257 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 FLRT3Q9NZU0 649 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 SH3BP4Q9P0V3 963 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 RAP2CQ9Y3L5 183 aa12.86□□□□□ -0.35
CTHRC1-201ENST00000330295 TMEM120BA0PK00 339 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 ATP6V1G2-DDX39BF2Z307 99 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 PDPK1O15530 556 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 AKAP10O43572 662 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 NME6O75414 186 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 SKAP2O75563 359 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 LYPLA1O75608 230 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 JUNP05412 331 aaKnown RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 PRPS2P11908 318 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 BCKDHAP12694 445 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 ME2P23368 584 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 PRTN3P24158 256 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 PSMA4P25789 261 aaKnown RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 PPOXP50336 477 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 RPL14P50914 215 aaKnown RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 IDH3GP51553 393 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 MRPS35P82673 323 aaKnown RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 RASGEF1BQ0VAM2 473 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 RFTN2Q52LD8 501 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 FAM180BQ6P0A1 224 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 NATD1Q8N6N6 113 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 OR4N2Q8NGD1 307 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 OR2T11Q8NH01 316 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 CPNE4Q96A23 557 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 ZBTB9Q96C00 473 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 TSSK3Q96PN8 268 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 SRXN1Q9BYN0 137 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 TMBIM4Q9HC24 238 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 ATAD3AQ9NVI7 634 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 DDX18Q9NVP1 670 aaKnown RBP12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 NTMQ9P121 344 aa12.85□□□□□ -0.35
CTHRC1-201ENST00000330295 TENM3Q9P273 2699 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 A0A087WV62 115 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 IGLV3-32A0A0A0MS00 114 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 B9A039 149 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 M0QZ24 198 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 SDC1P18827 310 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 BGNP21810 368 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 SERPINF1P36955 418 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 MANFP55145 182 aaKnown RBP12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 SMU1Q2TAY7 513 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 XKR7Q5GH72 579 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 C6orf136Q5SQH8 315 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 VAX1Q5SQQ9 334 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 AGBL2Q5U5Z8 902 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 HDXQ7Z353 690 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 MARCH3Q86UD3 253 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 SYT14Q8NB59 555 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 MGARPQ8TDB4 240 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 WDR60Q8WVS4 1066 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 NEU4Q8WWR8 484 aaPredicted RBP12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 FCRL1Q96LA6 429 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 RNF145Q96MT1 663 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 AMDHD1Q96NU7 426 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 ZMAT3Q9HA38 289 aaKnown RBP12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 BCO1Q9HAY6 547 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 TIGARQ9NQ88 270 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 FAM120CQ9NX05 1096 aaKnown RBP12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 MRTO4Q9UKD2 239 aaKnown RBP12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 OR10H1Q9Y4A9 318 aa12.84□□□□□ -0.35
CTHRC1-201ENST00000330295 A0A087WZY1 265 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 TRAV20A0A0B4J274 112 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 CIB4A0PJX0 185 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 TBX19O60806 448 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 IFI6P09912 130 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 PRPS1L1P21108 318 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 MDKP21741 143 aaPredicted RBP12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 CLK3P49761 638 aaKnown RBP12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 SRSF4Q08170 494 aaKnown RBP12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 ZNF155Q12901 538 aaPredicted RBP12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 MPP2Q14168 576 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 VPS26BQ4G0F5 336 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 IL23RQ5VWK5 629 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 SPATA19Q7Z5L4 167 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 SLC44A2Q8IWA5 706 aaPredicted RBP12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 CEP70Q8NHQ1 597 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 C22orf15Q8WYQ4 148 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 EGLN2Q96KS0 407 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 DUX5Q96PT3 197 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 CXorf36Q9H7Y0 433 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 ANKRA2Q9H9E1 313 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 C3orf14Q9HBI5 128 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 THAP1Q9NVV9 213 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 BAIAP2L1Q9UHR4 511 aa12.83□□□□□ -0.36
CTHRC1-201ENST00000330295 MOKQ9UQ07 419 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms