RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 IFNGP01579 166 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 COL9A1P20849 921 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 IGFBP4P22692 258 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 STOMP27105 288 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 SLC6A6P31641 620 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 KIAA1024LP59773 190 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 C19orf57Q0VDD7 668 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 HTR4Q13639 388 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 C9orf62Q8N4C0 152 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 OR5T3Q8NGG3 340 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 RERGQ96A58 199 aaPredicted RBP14.16□□□□□ -0.14
BRCC3-201ENST00000330045 PTCHD1Q96NR3 888 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 CITED4Q96RK1 184 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 TTTY10Q9BZA0 68 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 IL21RQ9HBE5 538 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 CAPN10Q9HC96 672 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 ING4Q9UNL4 249 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 CA5BQ9Y2D0 317 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 NUBP2Q9Y5Y2 271 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 A0A1B0GWA3 101 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 A0A1W2PPK0 400 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 OR6C74A6NCV1 312 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 H0Y8X5 98 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 H0YGG7 62 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 CYR61O00622 381 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 TCRBP04435 133 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 CD3GP09693 182 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 HCCSP53701 268 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 ARF3P61204 181 aaPredicted RBP14.16□□□□□ -0.14
BRCC3-201ENST00000330045 MGAT2Q10469 447 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 ANGPT1Q15389 498 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 TP53I3Q53FA7 332 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 TMEM196Q5HYL7 178 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 ARHGAP11AQ6P4F7 1023 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 THAP4Q8WY91 577 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 YIPF5Q969M3 257 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 TMEM168Q9H0V1 697 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 MCCC2Q9HCC0 563 aa14.16□□□□□ -0.14
BRCC3-201ENST00000330045 UBL3O95164 117 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 NGFRP08138 427 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 HOXC4P09017 264 aaPredicted RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 SNRPBP14678 240 aaKnown RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ATF1P18846 271 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 MMP15P51511 669 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 PITPNAQ00169 270 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 NFATC4Q14934 902 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 RNASE12Q5GAN4 147 aaKnown RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 TMEM31Q5JXX7 168 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 RFLNBQ8N5W9 214 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 SMRP1Q8NCR6 262 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 OR52E2Q8NGJ4 325 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 FAM3CQ92520 227 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ERMAPQ96PL5 475 aaPredicted RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 POLE3Q9NRF9 147 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ABRACLQ9P1F3 81 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 SLC23A1Q9UHI7 598 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ZNF222Q9UK12 451 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 MRPS7Q9Y2R9 242 aaKnown RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 SPEGQ15772 3267 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 OGG1O15527 345 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 NDUFB5O43674 189 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 EPXP11678 715 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 TNFRSF4P43489 277 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 FHL1Q13642 323 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ZC3H14Q6PJT7 736 aaKnown RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 SIAH3Q8IW03 269 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ARL14Q8N4G2 192 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 OR11H7Q8NGC8 314 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ZMYND19Q96E35 227 aaPredicted RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 WDR92Q96MX6 357 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ZFP3Q96NJ6 502 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 SMAD5Q99717 465 aaKnown RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 ZNF426Q9BUY5 554 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 MRPL39Q9NYK5 338 aaKnown RBP14.15□□□□□ -0.14
BRCC3-201ENST00000330045 TEKT2Q9UIF3 430 aa14.15□□□□□ -0.14
BRCC3-201ENST00000330045 A0A0B4J203 849 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 TEX13CA0A0J9YWL9 993 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 MAGEB4O15481 346 aaPredicted RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 FLRT2O43155 660 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 ADAM11O75078 769 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 NKX2-2O95096 273 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 RASGRP1O95267 797 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 TFP02787 698 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 GIFP27352 417 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 NTSR1P30989 418 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 CTHP32929 405 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 RBM34P42696 430 aaKnown RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 GDI2P50395 445 aaKnown RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 GBX2P52951 348 aaPredicted RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 DGCR2P98153 550 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 CRYZQ08257 329 aaKnown RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 GPR18Q14330 331 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 ALG10BQ5I7T1 473 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 SYT9Q86SS6 491 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 FAM98AQ8NCA5 519 aaKnown RBP14.14□□□□□ -0.15
BRCC3-201ENST00000330045 SDR9C7Q8NEX9 313 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 OR4D9Q8NGE8 314 aa14.14□□□□□ -0.15
BRCC3-201ENST00000330045 CTHRC1Q96CG8 243 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms