RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZNF224Q9NZL3 707 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 FLVCR2Q9UPI3 526 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 RCE1Q9Y256 329 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 A8MUA0 341 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 IDSB3KWA1 339 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 IMPA2O14732 288 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 SCO1O75880 301 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ARL6IP5O75915 188 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 NUDT14O95848 222 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 IGHA1P01876 353 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CXCL3P19876 107 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 RPS27P42677 84 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 EFNB1P98172 346 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ARHGAP11BQ3KRB8 267 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 FAAH2Q6GMR7 532 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CDH24Q86UP0 819 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CSNK1A1LQ8N752 337 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 GALNT6Q8NCL4 622 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 TMEM52Q8NDY8 209 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 FAM3CQ92520 227 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 NIPAL2Q9H841 368 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 SRA1Q9HD15 236 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 SELENOFO60613 162 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 RFPL3O75679 317 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 KLF8O95600 359 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CT62P0C5K7 136 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ATF1P18846 271 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 AHCYP23526 432 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ITPRIPL2Q3MIP1 535 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 VASNQ6EMK4 673 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 CHMP1BQ7LBR1 199 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 TAF8Q7Z7C8 310 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 PAQR7Q86WK9 346 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 DUSP18Q8NEJ0 188 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 RSPH9Q9H1X1 276 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 MKKSQ9NPJ1 570 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF346Q9UL40 294 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 EXOGQ9Y2C4 368 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 WDR87Q6ZQQ6 2873 aa11.91□□□□□ -0.5
HMGCS1-201ENST00000325110 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 RAD1O60671 282 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 RLN1P04808 185 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 HIST1H1CP16403 213 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 NDUFS1P28331 727 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 ADPRHP54922 357 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 ANGPT1Q15389 498 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 PRAMEF8Q5VWM4 474 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 PRAMEF7Q5VXH5 474 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 CCDC28AQ8IWP9 274 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 MEIOBQ8N635 442 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 CCDC120Q96HB5 630 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 FOXN4Q96NZ1 517 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 TSSK2Q96PF2 358 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 FKBP7Q9Y680 259 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 LRRK1Q38SD2 2015 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 A0A0A6YYC8 382 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 I3L1I5 382 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 GATBO75879 557 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 CRYZL1O95825 349 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 RBMS1P29558 406 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 EMDP50402 254 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 TAS2R43P59537 309 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 LGALS3BPQ08380 585 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 DUSP8Q13202 625 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 TMEM240Q5SV17 173 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 FGD2Q7Z6J4 655 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 PRSS58Q8IYP2 241 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 LNX2Q8N448 690 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 RASD2Q96D21 266 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 WDR92Q96MX6 357 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 CNN2Q99439 309 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 PRSS27Q9BQR3 290 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 MEPEQ9NQ76 525 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 KCNE5Q9UJ90 142 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 SIGLEC7Q9Y286 467 aa11.9□□□□□ -0.5
HMGCS1-201ENST00000325110 H7C1C5 153 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 CHP2O43745 196 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 ICMTO60725 284 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 CSTAP01040 98 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 CTSEP14091 401 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 PPP1CAP62136 330 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 LCN6P62502 163 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 MAT1AQ00266 395 aaKnown RBP11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF425Q6IV72 752 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 PARM1Q6UWI2 310 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 RFPL4BQ6ZWI9 263 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 MS4A15Q8N5U1 240 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF511Q8NB15 262 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 KIR3DX1Q9H7L2 352 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF69Q9UC07 566 aa11.9□□□□□ -0.51
HMGCS1-201ENST00000325110 TP53BP1Q12888 1972 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 TVP23AA6NH52 213 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 BHLHE40O14503 412 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 GPR75O95800 540 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 HRGP04196 525 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 FBXO45P0C2W1 286 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 FXYD6P3P58550 94 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 TSPAN5P62079 268 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms