RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 BEX3Q00994 111 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SBSNQ6UWP8 590 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CLECL1Q8IZS7 167 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 P2RX7Q99572 595 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CPPED1Q9BRF8 314 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PUS1Q9Y606 427 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TRAV18A0A075B6X5 111 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CA12O43570 354 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 BRINP1O60477 761 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 INHBBP09529 407 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ELAVL4P26378 380 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 DSC1Q08554 894 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 EBPQ15125 230 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 DUSP28Q4G0W2 176 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 POMZP3Q6PJE2 187 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF705AQ6ZN79 300 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 OR52E2Q8NGJ4 325 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 C5orf34Q96MH7 638 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 WDFY2Q96P53 400 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 MRPL17Q9NRX2 175 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 BABAM2Q9NXR7 383 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TRIM77I1YAP6 450 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RAD51DO75771 328 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 KCNE1P15382 129 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PCMT1P22061 227 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PRDX3P30048 256 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 BDKRB1P46663 353 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 GGTA1PQ4G0N0 100 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RPL22L1Q6P5R6 122 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM107Q6UX40 140 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 CD300LGQ6UXG3 332 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 MEPCEQ7L2J0 689 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RIMKLAQ8IXN7 391 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 WDR20Q8TBZ3 569 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SFT2D1Q8WV19 159 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 TANKQ92844 425 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SLC25A18Q9H1K4 315 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 TSPAN10Q9H1Z9 355 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PHPT1Q9NRX4 125 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 NDOR1Q9UHB4 597 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PURGQ9UJV8 347 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 A0A0D9SEW6 157 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 MT-CO2P00403 227 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RABGGTBP53611 331 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 NDUFA6P56556 154 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 HSD11B2P80365 405 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ACY1Q03154 408 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 GPR17Q13304 367 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF792Q3KQV3 632 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM35AQ53FP2 167 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 LRIF1Q5T3J3 769 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 NRMQ8IXM6 262 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 NANOGP1Q8N7R0 232 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 METTL21AQ8WXB1 218 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SLC22A18Q96BI1 424 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RNF170Q96K19 258 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PRAP1Q96NZ9 151 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SORBS1Q9BX66 1292 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RNF167Q9H6Y7 350 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 I6L893 689 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ATP1B1P05026 303 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RHOP08100 348 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SYPP08247 313 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 DRD2P14416 443 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SDC1P18827 310 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PTNP21246 168 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ECI1P42126 302 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ZXDBP98169 803 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 TAF1CQ15572 869 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 CES4AQ5XG92 561 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 FUNDC1Q8IVP5 155 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 MFSD6LQ8IWD5 586 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 MS4A4EQ96PG1 132 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 MARVELD1Q9BSK0 173 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PAPOLGQ9BWT3 736 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 POLDIP3Q9BY77 421 aaKnown RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 TINAGL1Q9GZM7 467 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SLC25A31Q9H0C2 315 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 UBQLN3Q9H347 655 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ACTL8Q9H568 366 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SLC6A20Q9NP91 592 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ST8SIA5O15466 376 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 EMC8O43402 210 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 HBE1P02100 147 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ARSDP51689 593 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 KCTD11Q693B1 232 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 DLEU7Q6UYE1 221 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 OR56B1Q8NGI3 324 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 PHYHIPQ92561 330 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 HOXB13Q92826 284 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-201ENST00000322213 NECTIN4Q96NY8 510 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 KATNB1Q9BVA0 655 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 HCAR1Q9BXC0 346 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 BCO1Q9HAY6 547 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 ARNT2Q9HBZ2 717 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 BRWD3Q6RI45 1802 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 RAB5AP20339 215 aa6.61□□□□□ -1.35
SMC1A-201ENST00000322213 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms