RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ADAMTS9Q9P2N4 1935 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 PI4KAP42356 2102 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 A0A0G2JPF8 293 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 TRBV4-1A0A0J9YWV2 114 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 A0A1W2PPL8 197 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 RHPN2P1A8MT19 583 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 A8MXK9 166 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 HNRNPCL2B2RXH8 293 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 HNRNPCL3B7ZW38 293 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 INMT-MINDY4F8WBC2 141 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 HYAL3O43820 417 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-201ENST00000317677 ACSM4P0C7M7 580 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 HNRNPCL4P0DMR1 293 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 ALDH6A1Q02252 535 aaKnown RBP12.06□□□□□ -0.48
CPNE1-201ENST00000317677 SEC23BQ15437 767 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 PYDC2Q56P42 97 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 PMS2CLQ68D20 193 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 ZNF770Q6IQ21 691 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-201ENST00000317677 WDR5BQ86VZ2 330 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 METTL27Q8N6F8 245 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-201ENST00000317677 CLRN3Q8NCR9 226 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 UPRTQ96BW1 309 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 DIRAS2Q96HU8 199 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 LINC00052Q96N35 136 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 C12orf57Q99622 126 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 FUZQ9BT04 418 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 GPR83Q9NYM4 423 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 PTGFRNQ9P2B2 879 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 ACAD8Q9UKU7 415 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 A4GNTQ9UNA3 340 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 PLCL2Q9UPR0 1127 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 GPR55Q9Y2T6 319 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-201ENST00000317677 KCNK7Q9Y2U2 307 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 RALGAPA1Q6GYQ0 2036 aa12.06□□□□□ -0.48
CPNE1-201ENST00000317677 A0A0A6YYJ9 748 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CCDC163A0A0D9SF12 145 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CENPVL1A0A0U1RR11 272 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PQLC2LA1A4F0 135 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SH3D21A4FU49 640 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 OR2W5A6NFC9 320 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 LYRM1O43325 122 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 GADD45GO95257 159 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 HSMCR30P0CW71 290 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PPP2R1BP30154 601 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CRYBB2P43320 205 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 DHPSP49366 369 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 ERV3-1Q14264 604 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 EXOSC7Q15024 291 aaKnown RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PRAMEF8Q5VWM4 474 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PRAMEF7Q5VXH5 474 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 LYSMD4Q5XG99 296 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 FRRS1Q6ZNA5 592 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 RTL4Q6ZR62 310 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 LSRQ86X29 649 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 VRK2Q86Y07 508 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 TIGD4Q8IY51 512 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SLC9A6Q92581 669 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CTHRC1Q96CG8 243 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PEX11GQ96HA9 241 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 ELF4Q99607 663 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 NPAS1Q99742 590 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SLC19A3Q9BZV2 496 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PPP1R3EQ9H7J1 279 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 GALNT9Q9HCQ5 603 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SOHLH2Q9NX45 425 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 COA4Q9NYJ1 87 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 MRPS7Q9Y2R9 242 aaKnown RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SPACA6W5XKT8 324 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 VPS13AQ96RL7 3174 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 A0A1W2PQL4 384 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 HYKKA2RU49 373 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 A8MVJ9 347 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 LINC01387J3KSC0 135 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 NUDT21O43809 227 aaKnown RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PLOD3O60568 738 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 MPC2O95563 127 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CBX7O95931 251 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CKMT1AP12532 417 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 NT5EP21589 574 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 MAP3K8P41279 467 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 ANXA11P50995 505 aaKnown RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 ZNF91Q05481 1191 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 PUDPQ08623 228 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 FGFBP1Q14512 234 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 KLHL22Q53GT1 634 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 DDI2Q5TDH0 399 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CORO6Q6QEF8 472 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 DEF8Q6ZN54 512 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 OR6T1Q8NGN1 323 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SLC22A8Q8TCC7 542 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 ADAMTS15Q8TE58 950 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 MED18Q9BUE0 208 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 DPCDQ9BVM2 203 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 CHRNA10Q9GZZ6 450 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 NMNAT1Q9HAN9 279 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-201ENST00000317677 HHATLQ9HCP6 504 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 ADAP2Q9NPF8 381 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 HPF1Q9NWY4 346 aa12.05□□□□□ -0.48
CPNE1-201ENST00000317677 SDHAF2Q9NX18 166 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms