RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 PRDM9Q9NQV7 894 aa13.56□□□□□ -0.24
CLK4-201ENST00000316308 KLHL1Q9NR64 748 aa13.56□□□□□ -0.24
CLK4-201ENST00000316308 DHCR7Q9UBM7 475 aaKnown RBP13.56□□□□□ -0.24
CLK4-201ENST00000316308 PAIP2BQ9ULR5 123 aaKnown RBP13.56□□□□□ -0.24
CLK4-201ENST00000316308 OR10H1Q9Y4A9 318 aa13.56□□□□□ -0.24
CLK4-201ENST00000316308 LANCL1O43813 399 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 FMO6PO60774 539 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 CCNKO75909 580 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 TFPIP10646 304 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 ELK1P19419 428 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 PYCR1P32322 319 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 GALEQ14376 348 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 FGFBP1Q14512 234 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 SLC25A35Q3KQZ1 300 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 SNAP47Q5SQN1 464 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 PRSS58Q8IYP2 241 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 CDK20Q8IZL9 346 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 OR4C6Q8NH72 309 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 RASD2Q96D21 266 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 DGAT2Q96PD7 388 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 TSSK2Q96PF2 358 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 SLC38A3Q99624 504 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 CLEC4AQ9UMR7 237 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 SLC35A3Q9Y2D2 325 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 A0A1W2PRG6 482 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 DYRK3O43781 588 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 CSTAP01040 98 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 ALAS2P22557 587 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 MST1P26927 711 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 ACSM1Q08AH1 577 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 IL18Q14116 193 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 SF3B4Q15427 424 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■■□ 22.8
CLK4-201ENST00000316308 XKRXQ6PP77 449 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 LINC00114Q6XXX2 140 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 ZNF517Q6ZMY9 492 aaPredicted RBP13.55□□□□□ -0.24
CLK4-201ENST00000316308 NCCRP1Q6ZVX7 275 aaPredicted RBP13.55□□□□□ -0.24
CLK4-201ENST00000316308 GID4Q8IVV7 300 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 ZNF615Q8N8J6 731 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 TMCO6Q96DC7 493 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 HOXD1Q9GZZ0 328 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 ERVMER34-1Q9H9K5 563 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 KRCC1Q9NPI7 259 aaPredicted RBP13.55□□□□□ -0.24
CLK4-201ENST00000316308 BOLA1Q9Y3E2 137 aa13.55□□□□□ -0.24
CLK4-201ENST00000316308 MN1Q10571 1320 aaPredicted RBP13.55□□□□□ -0.24
CLK4-201ENST00000316308 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.54□□□□□ -0.24
CLK4-201ENST00000316308 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
CLK4-201ENST00000316308 Q8N402 240 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 OR6F1Q8NGZ6 308 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 PGLYRP3Q96LB9 341 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 ASB6Q9NWX5 421 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 CHRNA9Q9UGM1 479 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 PCDHGB2Q9Y5G2 931 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
CLK4-201ENST00000316308 A0A0G2JMP0 313 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 A0A0X1KG70 313 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 MEIOCA2RUB1 952 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 A6NL46 340 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 RIIAD1A6NNX1 92 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 PRR32B1ATL7 298 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 HCN1O60741 890 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 COQ9O75208 318 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 PEPDP12955 493 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 CD1CP29017 333 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 CCR4P51679 360 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 IFITM2Q01629 132 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 RSBN1Q5VWQ0 802 aaPredicted RBP13.54□□□□□ -0.24
CLK4-201ENST00000316308 TTLL10Q6ZVT0 673 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 MED25Q71SY5 747 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 SYT13Q7L8C5 426 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 LSMEM1Q8N8F7 131 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 FAM98AQ8NCA5 519 aaKnown RBP13.54□□□□□ -0.24
CLK4-201ENST00000316308 OR4M2Q8NGB6 313 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 MOSPD2Q8NHP6 518 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 SOSTQ9BQB4 213 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 PNO1Q9NRX1 252 aaKnown RBP13.54□□□□□ -0.24
CLK4-201ENST00000316308 COPS3Q9UNS2 423 aa13.54□□□□□ -0.24
CLK4-201ENST00000316308 IGKV1D-42A0A075B6H8 117 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 A0A1W2PR77 199 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 OR6C68A6NDL8 312 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 B4DXG7 233 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 SELENOFO60613 162 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 AK1P00568 194 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 PSMB10P40306 273 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 MLLT3P42568 568 aaPredicted RBP13.53□□□□□ -0.24
CLK4-201ENST00000316308 EVX1P49640 407 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 CSNK1EP49674 416 aaKnown RBP13.53□□□□□ -0.24
CLK4-201ENST00000316308 COPZ1P61923 177 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 ERVK-25P63136 954 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 CFHR1Q03591 330 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 SCN1BQ07699 218 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 ATAD3CQ5T2N8 411 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 PAMR1Q6UXH9 720 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 RTL4Q6ZR62 310 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 GRAMD2AQ8IUY3 354 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 SLC7A5P1Q8MH63 180 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 C3orf49Q96BT1 292 aa13.53□□□□□ -0.24
CLK4-201ENST00000316308 MOGAT1Q96PD6 335 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms