RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 TMEM203Q969S6 136 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 ZC3H10Q96K80 434 aaKnown RBP16.8■□□□□ 0.28
CCDC43-201ENST00000315286 ASPNQ9BXN1 380 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 C6orf62Q9GZU0 229 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-201ENST00000315286 OR51V1Q9H2C8 321 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 ISYNA1Q9NPH2 558 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 WDFY4Q6ZS81 3184 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 PCNX3Q9H6A9 2034 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ELOA3DA6NLF2 546 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 LRRTM2O43300 516 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 PPM1BO75688 479 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 LALBAP00709 142 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 CLUP10909 449 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 HK1P19367 917 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 PAICSP22234 425 aaKnown RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 MST1P26927 711 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ABCD3P28288 659 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 PLCXD2Q0VAA5 305 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 TPBGQ13641 420 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ELOA3BQ3SY89 546 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ATG4DQ86TL0 474 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF441Q8N8Z8 693 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ELOA3Q8NG57 546 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 OMA1Q96E52 524 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 NECAB3Q96P71 396 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ERMAPQ96PL5 475 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 SSR3Q9UNL2 185 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 YARS2Q9Y2Z4 477 aaKnown RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 A3GALT2U3KPV4 340 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 hCG_2014768A0A024R1R8 64 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 OR6C76A6NM76 312 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 C17orf51A8MQB3 221 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 IDSB3KWA1 339 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 NDUFB2O95178 105 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF791Q3KP31 576 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 PRR23CQ6ZRP0 262 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 MARCH3Q86UD3 253 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 SLC43A2Q8N370 569 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 ZFP41Q8N8Y5 198 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 TEAD3Q99594 435 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 JAM3Q9BX67 310 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 LAT2Q9GZY6 243 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 APMAPQ9HDC9 416 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 CHRNA9Q9UGM1 479 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 FBXL4Q9UKA2 621 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 B3GNT3Q9Y2A9 372 aa16.79■□□□□ 0.28
CCDC43-201ENST00000315286 SF3B6Q9Y3B4 125 aaKnown RBP16.79■□□□□ 0.28
CCDC43-201ENST00000315286 CCDC182A6NF36 153 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 MCIDASD6RGH6 385 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 GMFGO60234 142 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 PNMTP11086 282 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF3P17036 446 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 LCN1P31025 176 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 RPS19P39019 145 aaKnown RBP16.78■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF117Q03924 483 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 GXYLT1Q4G148 440 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 KLHL36Q8N4N3 616 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 SLC19A3Q9BZV2 496 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 RERGLQ9H628 205 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 OCIAD1Q9NX40 245 aa16.78■□□□□ 0.28
CCDC43-201ENST00000315286 C12orf71A8MTZ7 269 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 OR7A10O76100 309 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 HEXBP07686 556 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 SLC2A5P22732 501 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 SLC16A1P53985 500 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 RPS7P62081 194 aaKnown RBP16.77■□□□□ 0.28
CCDC43-201ENST00000315286 RPS25P62851 125 aaKnown RBP16.77■□□□□ 0.28
CCDC43-201ENST00000315286 DCDP81605 110 aaKnown RBP16.77■□□□□ 0.28
CCDC43-201ENST00000315286 DAB2P98082 770 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 TRIM61Q5EBN2 209 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 PHF19Q5T6S3 580 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 ARHGAP11AQ6P4F7 1023 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 ANKRD37Q7Z713 158 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 ACBD7Q8N6N7 88 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 OR52E2Q8NGJ4 325 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 SPRYD4Q8WW59 207 aaPredicted RBP16.77■□□□□ 0.28
CCDC43-201ENST00000315286 UFD1Q92890 307 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 CCNL2Q96S94 520 aaPredicted RBP16.77■□□□□ 0.28
CCDC43-201ENST00000315286 TXNL4BQ9NX01 149 aaKnown RBP16.77■□□□□ 0.28
CCDC43-201ENST00000315286 TOR4AQ9NXH8 423 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF337Q9Y3M9 751 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 IER3IP1Q9Y5U9 82 aa16.77■□□□□ 0.28
CCDC43-201ENST00000315286 SLC22A31A6NKX4 558 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF670-ZNF695F2Z2N8 137 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 PLD2O14939 933 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 HCRTR2O43614 444 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 SOX6P35712 828 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 PNLIPRP2P54317 469 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 RNF4P78317 190 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF385CQ66K41 422 aaPredicted RBP16.77■□□□□ 0.27
CCDC43-201ENST00000315286 TMEM99Q8N816 258 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 OR4K13Q8NH42 304 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 OR52N1Q8NH53 320 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF563Q8TA94 476 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 TBX5Q99593 518 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 TM9SF2Q99805 663 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 ADAM18Q9Y3Q7 739 aa16.77■□□□□ 0.27
CCDC43-201ENST00000315286 ALG1L2C9J202 215 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 MAGEB3O15480 346 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 NDUFB5O43674 189 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms