RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MMP11P24347 488 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 FPR3P25089 353 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 GP2P55259 537 aaKnown RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 GPR18Q14330 331 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 SHISA6Q6ZSJ9 500 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 CELF2-AS1Q8N7Q2 184 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 TMEM255BQ8WV15 326 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 GHSRQ92847 366 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 OR5B2Q96R09 309 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 RBM24Q9BX46 236 aaKnown RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 SOCS6O14544 535 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 SRPX2O60687 465 aaPredicted RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 CRTAPO75718 401 aaPredicted RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 P04436 131 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 RAB40ALP0C0E4 278 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 HTR1FP30939 366 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 BCL6P41182 706 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 CYCSP99999 105 aaKnown RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 EFR3AQ14156 821 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 RAB40AQ8WXH6 277 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 ACER3Q9NUN7 267 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 CDK5RAP2Q96SN8 1893 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 RAB3AP20336 220 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 EMP2P54851 167 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 DLX5P56178 289 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ANKRD34AQ69YU3 496 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 BEND4Q6ZU67 534 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 GDF7Q7Z4P5 450 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ZNF595Q8IYB9 648 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 NPRL2Q8WTW4 380 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ELP4Q96EB1 424 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ZNF419Q96HQ0 510 aaPredicted RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 PRR14Q9BWN1 585 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 LMAN1LQ9HAT1 526 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 MAN2C1Q9NTJ4 1040 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 K7ESM1 405 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 SHC1P29353 583 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 NUDT1P36639 197 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 AQP2P41181 271 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 PXNP49023 591 aaPredicted RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 MRPL49Q13405 166 aaKnown RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 CRMP1Q14194 572 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 RIMKLAQ8IXN7 391 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 HHIPQ96QV1 700 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ANKRD19PQ9H560 264 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 CDC14CA4D256 554 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ACOD1A6NK06 481 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 CLEC2LP0C7M8 214 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 OR8G3PP0DMU2 310 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 PTPN6P29350 595 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 TRIM23P36406 574 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 LBX1P52954 281 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 SNU13P55769 128 aaKnown RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 PER3P56645 1201 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 SLC26A5P58743 744 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 SIRPAP78324 504 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ZNF616Q08AN1 781 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 LRRC26Q2I0M4 334 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 RBM45Q8IUH3 476 aaKnown RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 SLC16A11Q8NCK7 471 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 SCGB1C1Q8TD33 95 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 PDXPQ96GD0 296 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 FOXN4Q96NZ1 517 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 GABARAPL1Q9H0R8 117 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 ELOVL3Q9HB03 270 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 LTB4R2Q9NPC1 389 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 THAP10Q9P2Z0 257 aaPredicted RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 OR2T7P0C7T2 308 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 MTNR1BP49286 362 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 YPEL5P62699 121 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 LTBQ06643 244 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 RIN1Q13671 783 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 OR7E24Q6IFN5 339 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 MFSD12Q6NUT3 480 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 OR51T1Q8NGJ9 327 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 OR2T27Q8NH04 317 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 RLN3Q8WXF3 142 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 EIF5A2Q9GZV4 153 aaKnown RBP12.82□□□□□ -0.36
SPAST-201ENST00000315285 RGCCQ9H4X1 137 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 DUSP21Q9H596 190 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 SRPK3Q9UPE1 567 aa12.82□□□□□ -0.36
SPAST-201ENST00000315285 H3BQ06 376 aaPredicted RBP12.81□□□□□ -0.36
SPAST-201ENST00000315285 ZNF264O43296 627 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 TSPAN12O95859 305 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 FOXK2Q01167 660 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 MALLQ13021 153 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 MYO7AQ13402 2215 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 SFXN4Q6P4A7 337 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 CYHR1Q6ZMK1 362 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 KCNS2Q9ULS6 477 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 ICKQ9UPZ9 632 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 KNG1P01042 644 aa12.81□□□□□ -0.36
SPAST-201ENST00000315285 TSFMP43897 325 aaKnown RBP12.81□□□□□ -0.36
SPAST-201ENST00000315285 METRNLQ641Q3 311 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms