RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZNF471Q9BX82 626 aaPredicted RBP12.55□□□□□ -0.4
RFFL-201ENST00000315249 MED16Q9Y2X0 877 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 RHBDD3Q9Y3P4 386 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 H0YAE9 185 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 DLGAP1O14490 977 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 PODNL1Q6PEZ8 512 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 ZNF300Q96RE9 604 aaPredicted RBP12.55□□□□□ -0.4
RFFL-201ENST00000315249 SLC6A15Q9H2J7 730 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 B3GNT2Q9NY97 397 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 RBMX2Q9Y388 322 aaKnown RBP12.55□□□□□ -0.4
RFFL-201ENST00000315249 TAPBPO15533 448 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 TUBA1BP68363 451 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 TUBA4AP68366 448 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 CD83Q01151 205 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 TUBA1AQ71U36 451 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 IP6K3Q96PC2 410 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 MICU1Q9BPX6 476 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 BIDP55957 195 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 TECPR1Q7Z6L1 1165 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 METTL25Q8N6Q8 603 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SORT1Q99523 831 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 RAB9BQ9NP90 201 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SLC6A20Q9NP91 592 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 RLIMQ9NVW2 624 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 PCDHGA7Q9Y5G6 932 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 LMO7DNF2Z398 122 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 H3BSA7 217 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SERPINA5P05154 406 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 HSD17B1P14061 328 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 RAB3AP20336 220 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 OR8B8Q15620 311 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 GRK1Q15835 563 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SLC36A2Q495M3 483 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 RUNDC3AQ59EK9 446 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 LCN8Q6JVE9 175 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 ABHD17CQ6PCB6 329 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 Q6ZNB5 142 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 MNTQ99583 582 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 PRRX2Q99811 253 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SLC23A2Q9UGH3 650 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 H7C1C5 153 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 STK17BO94768 372 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 GABRB3P28472 473 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 LCN6P62502 163 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 HTR4Q13639 388 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 TMEM71Q6P5X7 295 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 OR13C2Q8NGS9 318 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SLC41A2Q96JW4 573 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 NME7Q9Y5B8 376 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 CCDC187A0A096LP49 1063 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 FOXD2O60548 495 aaPredicted RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 IGLV3-27P01718 113 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 MT-ND2P03891 347 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 FURINP09958 794 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 VEZF1Q14119 521 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 ZNF808Q8N4W9 903 aaPredicted RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 ENDOVQ8N8Q3 282 aaKnown RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 OR5D14Q8NGL3 314 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 ACOT11Q8WXI4 607 aaPredicted RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 COG8Q96MW5 612 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 AIFM2Q9BRQ8 373 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 C12orf4Q9NQ89 552 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SORBS2O94875 1100 aaKnown RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 TRIP6Q15654 476 aaKnown RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 ELAVL1Q15717 326 aaKnown RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 KANSL1Q7Z3B3 1105 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 LRRC20Q8TCA0 184 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 BIRC8Q96P09 236 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
RFFL-201ENST00000315249 A0A1B0GVC2 190 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 CENPBD1B2RD01 187 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 TARM1B6A8C7 271 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 HPRP00739 348 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 HYAL4Q2M3T9 481 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 LRRC61Q9BV99 259 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 RDH8Q9NYR8 311 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 EMCNQ9ULC0 261 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 SLC6A5Q9Y345 797 aa12.54□□□□□ -0.4
RFFL-201ENST00000315249 EIF5AP63241 154 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 IL10RAQ13651 578 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 GFRALQ6UXV0 394 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 FAM217AQ8IXS0 508 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 H1FXQ92522 213 aaKnown RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 RFT1Q96AA3 541 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 ZNF285Q96NJ3 590 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 SAP130Q9H0E3 1048 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 OR52D1Q9H346 318 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 NELFAQ9H3P2 528 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 MEPEQ9NQ76 525 aaPredicted RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 KCNN3Q9UGI6 736 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
RFFL-201ENST00000315249 LOC105369274A0A096LPK9 316 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 FBP2O00757 339 aa12.53□□□□□ -0.4
RFFL-201ENST00000315249 DOK2O60496 412 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms