RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CGAP01215 116 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 THBS1P07996 1170 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 NCK1P16333 377 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 EIF1P41567 113 aaKnown RBP10.75□□□□□ -0.69
SCFD1-201ENST00000311943 OR1E2P47887 323 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 SLC7A2P52569 658 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 SELENBP1Q13228 472 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 LARS2Q15031 903 aaKnown RBP10.75□□□□□ -0.69
SCFD1-201ENST00000311943 GUSBP1Q15486 140 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 HSPB2Q16082 182 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 EXOC3L2Q2M3D2 409 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 C8orf82Q6P1X6 216 aaPredicted RBP10.75□□□□□ -0.69
SCFD1-201ENST00000311943 GRINAQ7Z429 371 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 KDM8Q8N371 416 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 FITM2Q8N6M3 262 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 C11orf65Q8NCR3 313 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 HIPK4Q8NE63 616 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 OR6T1Q8NGN1 323 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 RP9Q8TA86 221 aaKnown RBP10.75□□□□□ -0.69
SCFD1-201ENST00000311943 ASB5Q8WWX0 329 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 C3orf49Q96BT1 292 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 ECSITQ9BQ95 431 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 PRRG4Q9BZD6 226 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 ADAM19Q9H013 955 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 GALNT8Q9NY28 637 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 CHRNA9Q9UGM1 479 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 ADAM21Q9UKJ8 722 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 KLF2Q9Y5W3 355 aaPredicted RBP10.75□□□□□ -0.69
SCFD1-201ENST00000311943 NOTCH2Q04721 2471 aa10.75□□□□□ -0.69
SCFD1-201ENST00000311943 CCDC22O60826 627 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 IGHV3-9P01782 118 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 FESP07332 822 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 HOXD4P09016 255 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ETS2P15036 469 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 IGFBP2P18065 325 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 CD247P20963 164 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ADH6P28332 368 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 SLC7A1P30825 629 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 CPOXP36551 454 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 SLC1A3P43003 542 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.693e-6■□□□□ 10
SCFD1-201ENST00000311943 EGR4Q05215 589 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 C3orf33Q6P1S2 294 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ARMC8Q8IUR7 673 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 EID3Q8N140 333 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ST8SIA1Q92185 356 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ENKD1Q9H0I2 346 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 RAD21L1Q9H4I0 556 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 CALML5Q9NZT1 146 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ZNF629Q9UEG4 869 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-201ENST00000311943 SNX13Q9Y5W8 968 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 TEX15Q9BXT5 2789 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 TMEM247A6NEH6 219 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 A8MXE2 369 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 DVL2O14641 736 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 FPR1P21462 350 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 PPIBP23284 216 aaKnown RBP10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ELK4P28324 431 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 CCKARP32238 428 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 RPS3AP61247 264 aaKnown RBP10.74□□□□□ -0.69
SCFD1-201ENST00000311943 IRX1P78414 480 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-201ENST00000311943 SLC25A3Q00325 362 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 WDR88Q6ZMY6 472 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 MCEMP1Q8IX19 187 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 CMIPQ8IY22 773 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 RNF128Q8TEB7 428 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 TMEM234Q8WY98 164 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 KTI12Q96EK9 354 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-201ENST00000311943 TM9SF2Q99805 663 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 CRIM1Q9NZV1 1036 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 JKAMPQ9P055 326 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 ZNF232Q9UNY5 417 aa10.74□□□□□ -0.69
SCFD1-201ENST00000311943 PDZD2O15018 2839 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 IGKV1D-42A0A075B6H8 117 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 A0A1B0GWA3 101 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 SULT2B1O00204 365 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 AKR7A3O95154 331 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 TCN1P20061 433 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-201ENST00000311943 PRKAR1BP31321 381 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 PCGF2P35227 344 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 FOXG1P55316 489 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-201ENST00000311943 LIPEQ05469 1076 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 LRRC23Q53EV4 343 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-201ENST00000311943 TMPPEQ6ZT21 453 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 FCRLAQ7L513 359 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 ZNF550Q7Z398 422 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 ATG4DQ86TL0 474 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-201ENST00000311943 ACBD4Q8NC06 268 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 OR8J3Q8NGG0 315 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 RNF217Q8TC41 542 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 PSD2Q9BQI7 771 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 EGFL7Q9UHF1 273 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 PRSS50Q9UI38 385 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 ANGPT4Q9Y264 503 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 IFT52Q9Y366 437 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 SH3GLB1Q9Y371 365 aa10.73□□□□□ -0.69
SCFD1-201ENST00000311943 CPSF4LA6NMK7 179 aaKnown RBP10.72□□□□□ -0.69
SCFD1-201ENST00000311943 BBIP1A8MTZ0 92 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 LINC01387J3KSC0 135 aa10.72□□□□□ -0.69
SCFD1-201ENST00000311943 AGTR1P30556 359 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms