RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CLEC12AQ5QGZ9 265 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 C12orf73Q69YU5 71 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 RPL13AP3Q6NVV1 102 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 PTCHD4Q6ZW05 846 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 OAFQ86UD1 273 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 OR13C2Q8NGS9 318 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 RHOXF1Q8NHV9 184 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 FANK1Q8TC84 345 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 FRMD6Q96NE9 622 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 TEX12Q9BXU0 123 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 PTGES2Q9H7Z7 377 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 SLC25A19Q9HC21 320 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 ZNF226Q9NYT6 803 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 VDAC3Q9Y277 283 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 TMED7Q9Y3B3 224 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 ARGFXA6NJG6 315 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 B4DXG7 233 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 NKX2-8O15522 239 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 HCN1O60741 890 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 SLC34A2O95436 690 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 CH25HO95992 272 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 P04436 131 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 PRKAR1AP10644 381 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 BMP7P18075 431 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 CASRP41180 1078 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 SRSF6Q13247 344 aaKnown RBP20.47■□□□□ 0.87
IRF3-201ENST00000309877 BLMHQ13867 455 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 INPP5JQ15735 1006 aaPredicted RBP20.47■□□□□ 0.87
IRF3-201ENST00000309877 ARSKQ6UWY0 536 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 C10orf53Q8N6V4 93 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 BPIFB6Q8NFQ5 453 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 TSPAN14Q8NG11 270 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 OR2M3Q8NG83 312 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 OR52L1Q8NGH7 329 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 OR8D4Q8NGM9 314 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 SAMD8Q96LT4 415 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 OR52D1Q9H346 318 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 MED17Q9NVC6 651 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 TVP23BQ9NYZ1 205 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 KLK13Q9UKR3 277 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 BLOC1S6Q9UL45 172 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 HRH3Q9Y5N1 445 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 CEP250Q9BV73 2442 aa20.47■□□□□ 0.87
IRF3-201ENST00000309877 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 ANKRD33BA6NCL7 494 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 IGF2P01344 180 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 PRKCAP17252 672 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 FMO3P31513 532 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 MASP1P48740 699 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 CLN3Q13286 438 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 LAIR2Q6ISS4 152 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 ACSM5Q6NUN0 579 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 SMARCD3Q6STE5 483 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 MDGA2Q7Z553 956 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 PLCZ1Q86YW0 608 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 WDSUB1Q8N9V3 476 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 OR51A7Q8NH64 312 aa20.46■□□□□ 0.87
IRF3-201ENST00000309877 TRAV27A0A087WT01 109 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 M0R129 80 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SUSD5O60279 629 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 OR7A10O76100 309 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SNX4O95219 450 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SLC9A3P48764 834 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 EGR4Q05215 589 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 ZBED5Q49AG3 693 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 ADGRG3Q86Y34 549 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 GALNT16Q8N428 558 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 FADS6Q8N9I5 356 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 TRUB1Q8WWH5 349 aaKnown RBP20.45■□□□□ 0.86
IRF3-201ENST00000309877 PRRG3Q9BZD7 231 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SACM1LQ9NTJ5 587 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 FBXL2Q9UKC9 423 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SIGLEC7Q9Y286 467 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 G3V3Y1 287 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SLC1A7O00341 560 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 PTP4A3O75365 173 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 CRHBPP24387 322 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 EEF1B2P24534 225 aaKnown RBP20.45■□□□□ 0.86
IRF3-201ENST00000309877 APOBEC1P41238 236 aaKnown RBP20.45■□□□□ 0.86
IRF3-201ENST00000309877 CXCR4P61073 352 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 OR2T33Q8NG76 320 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 APH1BQ8WW43 257 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SLC38A2Q96QD8 506 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 TNFRSF13CQ96RJ3 184 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 UTP23Q9BRU9 249 aaKnown RBP20.45■□□□□ 0.86
IRF3-201ENST00000309877 PROK2Q9HC23 129 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 SCN3BQ9NY72 215 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 IL20RAQ9UHF4 553 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 ZNF337Q9Y3M9 751 aa20.45■□□□□ 0.86
IRF3-201ENST00000309877 TMEM72A0PK05 275 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 LRRN3E7EW58 273 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 WBP4O75554 376 aaKnown RBP20.44■□□□□ 0.86
IRF3-201ENST00000309877 CCDC159P0C7I6 412 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 ATP6V1B1P15313 513 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 FOXF1Q12946 379 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 SNAPC1Q16533 368 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 PSD4Q8NDX1 1056 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 OR1J4Q8NGS1 313 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 ZNF566Q969W8 418 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 KTI12Q96EK9 354 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms