RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TREX2Q9BQ50 279 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 CHMP1AQ9HD42 196 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 WASH6PQ9NQA3 447 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TEX13DA0A0J9YY54 714 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 LINC01549A6NIU2 74 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CRYZL1O95825 349 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 WNT11O96014 354 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ITPKAP23677 461 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 HK3P52790 923 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 DNASE1L3Q13609 305 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TCEANCQ8N8B7 351 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 APH1BQ8WW43 257 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 MYLIPQ8WY64 445 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TFAP2BQ92481 460 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TRIM43Q96BQ3 446 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZBTB45Q96K62 511 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 LHPPQ9H008 270 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 HRH4Q9H3N8 390 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TRAPPC4Q9Y296 219 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZFAND5O76080 213 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SERPINE2P07093 398 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 LIPAP38571 399 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 MAXP61244 160 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SH3BP2P78314 561 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 C11orf91Q3C1V1 193 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PTERQ96BW5 349 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 MRGPRX2Q96LB1 330 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 THAP7Q9BT49 309 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 EDEM2Q9BV94 578 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZNF395Q9H8N7 513 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 WDR76Q9H967 626 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 NPIPB13A6NJU9 1138 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 NPIPB4C9JG80 1138 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 C1QBP02746 253 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PSMB1P20618 241 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 CNR1P21554 472 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TACR3P29371 465 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 LDLRAD1Q5T700 205 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 MED9Q9NWA0 146 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 FOXJ3Q9UPW0 622 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 HMSDA8MTL9 139 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PGA3P0DJD8 388 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CTSAP10619 480 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 HTR2CP28335 458 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SLC6A9P48067 706 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SIX1Q15475 284 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZNF852Q6ZMS4 543 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 WDTC1Q8N5D0 677 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SPICQ8N5J4 248 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 DBF4BQ8NFT6 615 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SGK3Q96BR1 496 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 KCNE1BA0A087WTH5 132 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 F5H5P2 479 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 KIAA0513O60268 411 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 AQP8O94778 261 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ADRA2CP18825 462 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 VAMP1P23763 118 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR2A2Q6IF42 318 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 COMMD6Q7Z4G1 85 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SLC22A16Q86VW1 577 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GJC3Q8NFK1 279 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR10R2Q8NGX6 335 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 KIR3DX1Q9H7L2 352 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 UBE2ZQ9H832 354 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 ENAMQ9NRM1 1142 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 KPTNQ9Y664 436 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CACNA1DQ01668 2161 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 KNL1Q8NG31 2342 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ELOA3CA0A087WX78 387 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 hCG_1807616A0A1W2PRN6 198 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 HHLA1C9JL84 531 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 BOLA2-SMG1P6H3BVE0 249 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CTDSPLO15194 276 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 AOAHP28039 575 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 HTRA4P83105 476 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 RNF111Q6ZNA4 994 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OTOP2Q7RTS6 562 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SSX9Q7RTT3 188 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 NUP43Q8NFH3 380 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TSTD1Q8NFU3 115 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TTC9Q92623 222 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CPNE4Q96A23 557 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 ERVK-18Q9QC07 812 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 DUXBA0A1W2PPF3 345 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TNFRSF10AO00220 468 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 LCKP06239 509 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 STAG3L2P0CL84 134 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GFOD2Q3B7J2 385 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GALNTL5Q7Z4T8 443 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 EXOSC8Q96B26 276 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 SMIM19Q96E16 107 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GMLQ99445 158 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 DDOQ99489 341 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TSPAN10Q9H1Z9 355 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 CUTCQ9NTM9 273 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 V9GY05 133 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 F5P12259 2224 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 A0A1B0GUH1 482 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SDHDO14521 159 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SSTR3P32745 418 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms