RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PDGFAP04085 211 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ALDOCP09972 364 aaKnown RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 C1orf220Q5T0J3 134 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 TSSK4Q6SA08 328 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ZNF783Q6ZMS7 281 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 OVCH1Q7RTY7 1134 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 PIANPQ8IYJ0 282 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 FRMD1Q8N878 549 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 SLC35B4Q969S0 331 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 C12orf42Q96LP6 360 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 CTRCQ99895 268 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ZNF443Q9Y2A4 671 aaPredicted RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 KRBOX1C9JBD0 128 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 CACNG3O60359 315 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 TSPYL5Q86VY4 417 aaPredicted RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 WDR92Q96MX6 357 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 ZNF436Q9C0F3 470 aaPredicted RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 NKX2-4Q9H2Z4 354 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 HEBP1Q9NRV9 189 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 GAB2Q9UQC2 676 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 V9GYS6 101 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 CHD4Q14839 1912 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 SERTM2A0A1B0GWG4 89 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 SLC9B1P1A6NJY1 282 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 HS3ST1O14792 307 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 TO15178 435 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 TSFMP43897 325 aaKnown RBP11.83□□□□□ -0.52
USP38-201ENST00000307017 PLAG1Q6DJT9 500 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 BPIFB2Q8N4F0 458 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 NMNAT2Q9BZQ4 307 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 MROH1Q8NDA8 1641 aa11.83□□□□□ -0.52
USP38-201ENST00000307017 HIDE1A8MVS5 230 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 NME2P1O60361 137 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SEC14L2O76054 403 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 ARHGAP19Q14CB8 494 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 MAMDC2Q7Z304 686 aaPredicted RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 PLPP7Q8NBV4 271 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SFXN5Q8TD22 340 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 CD200R1Q8TD46 325 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SYT17Q9BSW7 474 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 DMRT3Q9NQL9 472 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 C7orf72A4D263 438 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 ZNF718Q3SXZ3 478 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 LCN8Q6JVE9 175 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 GOLM1Q8NBJ4 401 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 RBMXL1Q96E39 390 aaKnown RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 GIMAP5Q96F15 307 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 NXT1Q9UKK6 140 aaKnown RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 A0A0B4J203 849 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 TRAPPC13A5PLN9 417 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 DUX1O43812 170 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 GPX3P22352 226 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 OR1Q1Q15612 314 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SSX7Q7RTT5 188 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 MMP21Q8N119 569 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 OR2T11Q8NH01 316 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 ZNF461Q8TAF7 563 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 CLCF1Q9UBD9 225 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SDC1P18827 310 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 FCER1GP30273 86 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 DAPP51397 102 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 GABARAPL2P60520 117 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SLC36A2Q495M3 483 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 AADACL3Q5VUY0 350 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 OR13C9Q8NGT0 318 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 ADAMTS16Q8TE57 1224 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 GFOD1Q9NXC2 390 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 LOC285095A0A1B0GVY8 99 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 KLHL33A6NCF5 533 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 ZNF891A8MT65 544 aaPredicted RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 PRAMEF2O60811 474 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 PTTG1O95997 202 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 MAKP20794 623 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 EXOSC2Q13868 293 aaKnown RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 UBE2NLQ5JXB2 153 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 CTSL3PQ5NE16 218 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 RNLSQ5VYX0 342 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 GPR26Q8NDV2 337 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 OR9A4Q8NGU2 314 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 LGALS14Q8TCE9 139 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 MAGIXQ9H6Y5 334 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 V9GY05 133 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 A0A1W2PS29 197 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 TP53I11O14683 189 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SELENOFO60613 162 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 HOXB9P17482 250 aaPredicted RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 PTGER4P35408 488 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 SLC6A11P48066 632 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 TAP2Q03519 686 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 OR8G2PQ6IF36 304 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 RHBDF1Q96CC6 855 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 NTNG1Q9Y2I2 539 aa11.82□□□□□ -0.52
USP38-201ENST00000307017 PTRH2Q9Y3E5 179 aaKnown RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 COL1A1P02452 1464 aaPredicted RBP11.82□□□□□ -0.52
USP38-201ENST00000307017 PTHP01270 115 aa11.81□□□□□ -0.52
USP38-201ENST00000307017 UBL4AP11441 157 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms