RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FCMRO60667 390 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 SEMA7AO75326 666 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 IGFBP4P22692 258 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 HTR2AP28223 471 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 IRF5Q13568 498 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 LINC00303Q3SY05 128 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 DNAAF1Q8NEP3 725 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 TTLQ8NG68 377 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 OR5M1Q8NGP8 315 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 CDS1Q92903 461 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ALG14Q96F25 216 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 CPNE2Q96FN4 548 aaPredicted RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 MTHFD2LQ9H903 347 aaPredicted RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 BIN3Q9NQY0 253 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 GMEB2Q9UKD1 530 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 SLC35A3Q9Y2D2 325 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ZNF646O15015 1829 aaPredicted RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 MCRIP1C9JLW8 97 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 FBXO45P0C2W1 286 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 CLUP10909 449 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 CAPZA2P47755 286 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 RAG2P55895 527 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 SIRPAP78324 504 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 BDH1Q02338 343 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ZNF155Q12901 538 aaPredicted RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 RIN1Q13671 783 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 PUS10Q3MIT2 529 aaKnown RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 RPL13AP3Q6NVV1 102 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 FIGNL1Q6PIW4 674 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 JAZF1Q86VZ6 243 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ZNF227Q86WZ6 799 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ARL14Q8N4G2 192 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ACTRT3Q9BYD9 372 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 COMMD4Q9H0A8 199 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 FN3KQ9H479 309 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 GABARAPH6UMI1 98 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 FARS2O95363 451 aaKnown RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 PRNPP04156 253 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ANKRD34CP0C6C1 535 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 HPGDP15428 266 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 CERS1P27544 350 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 RORAP35398 523 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 POU4F2Q12837 409 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 LRFN4Q6PJG9 635 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 KCTD9Q7L273 389 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ARIH2OSQ8N7S6 290 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 DNTTIP1Q9H147 329 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 NRIP3Q9NQ35 241 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 C14orf105Q9NVL8 296 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 IL20Q9NYY1 176 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 HS3ST2Q9Y278 367 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 C13orf42A0A1B0GVH6 325 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 C1QTNF3-AMACRE9PGA6 284 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 LIPCP11150 499 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 SGPP1Q9BX95 441 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 LDAHQ9H6V9 325 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 IFT22Q9H7X7 185 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 GPR55Q9Y2T6 319 aaPredicted RBP12.1□□□□□ -0.47
TRIM35-201ENST00000305364 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 CACNB4O00305 520 aaPredicted RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 SYT5O00445 386 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 OR6A2O95222 327 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 TACSTD2P09758 323 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 HSD17B2P37059 387 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 RBMS2Q15434 407 aaKnown RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 ACOT4Q8N9L9 421 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 KCT2Q8NC54 265 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 OR8D1Q8WZ84 308 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 ZC3H10Q96K80 434 aaKnown RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 UBL7Q96S82 380 aaPredicted RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 MRPS18AQ9NVS2 196 aaKnown RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 SLCO1C1Q9NYB5 712 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 SLC22A23A1A5C7 686 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 AGR2O95994 175 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 ASGR2P07307 311 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 NMBP08949 121 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 ITPKBP27987 946 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 PDX1P52945 283 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 EOGTQ5NDL2 527 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 PFN4Q8NHR9 129 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 C2CD4CQ8TF44 421 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 C19orf43Q9BQ61 176 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 SOSTQ9BQB4 213 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 TRBV23OR9-2A0A075B6M9 112 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 ANKRD61A6NGH8 418 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 SGCEO43556 437 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 HYAL3O43820 417 aaPredicted RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 VNN2O95498 520 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 CXCL2P19875 107 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 TRHRP34981 398 aaPredicted RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 BSGP35613 385 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 LUMP51884 338 aaPredicted RBP12.09□□□□□ -0.47
TRIM35-201ENST00000305364 CAP1Q01518 475 aa12.09□□□□□ -0.47
TRIM35-201ENST00000305364 TNFRSF17Q02223 184 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms