RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 PLA2G2CQ5R387 149 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 ZNF441Q8N8Z8 693 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 NFAM1Q8NET5 270 aaPredicted RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 DUSP19Q8WTR2 217 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 YIPF6Q96EC8 236 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 ERMAPQ96PL5 475 aaPredicted RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 BCL7BQ9BQE9 202 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC19A3Q9BZV2 496 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 B3GALT1Q9Y5Z6 326 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 LOC100506127A0A0U1RQW1 187 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 HIST1H2ABP04908 130 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 CYC1P08574 325 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 LIPAP38571 399 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 FBXW4P57775 412 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 RAB15P59190 212 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 VBP1P61758 197 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 FOXK2Q01167 660 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 NXNL2Q5VZ03 156 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 FCRLBQ6BAA4 426 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 THSD4Q6ZMP0 1018 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 DBX2Q6ZNG2 339 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 HIST3H2AQ7L7L0 130 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 RAB11FIP2Q7L804 512 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 LNX2Q8N448 690 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 FAM98AQ8NCA5 519 aaKnown RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 OR52I1Q8NGK6 324 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC22A8Q8TCC7 542 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 HIST1H2ACQ93077 130 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 OR5M11Q96RB7 305 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 OR51V1Q9H2C8 321 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 TMEM9BQ9NQ34 198 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 NANSQ9NR45 359 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 KLRF1Q9NZS2 232 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 ZNF337Q9Y3M9 751 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 N6AMT1Q9Y5N5 214 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 CACNA1HO95180 2353 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 KDM4EB2RXH2 506 aaPredicted RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 B4E171 279 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 SERPINI2O75830 405 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 GABARAPO95166 117 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 FOLR3P41439 243 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 TSPAN7P41732 249 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 E2F1Q01094 437 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 SPHARQ15513 63 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 TSTQ16762 297 aaKnown RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 ARHGAP11AQ6P4F7 1023 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 TMEM205Q6UW68 189 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 LGALS12Q96DT0 336 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 LRFN5Q96NI6 719 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 HINT3Q9NQE9 182 aaKnown RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 DIMT1Q9UNQ2 313 aaKnown RBP13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 KNTC1P50748 2209 aa13.26□□□□□ -0.29
SHCBP1-201ENST00000303383 LRRN3E7EW58 273 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 BLOC1S5-TXNDC5H3BN57 136 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 IRF3Q14653 427 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 LINC00114Q6XXX2 140 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC16A12Q6ZSM3 486 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 OR5W2Q8NH69 310 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 NDEL1Q9GZM8 345 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 ENKD1Q9H0I2 346 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 CLEC2DQ9UHP7 191 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 BHLHE40O14503 412 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 GALR2O43603 387 aaPredicted RBP13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 P2RX1P51575 399 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 TIMM50Q3ZCQ8 353 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 ATG4DQ86TL0 474 aaPredicted RBP13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 IGFN1Q86VF2 1251 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 MISPQ8IVT2 679 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 ZHX1-C8orf76Q96EF9 292 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 ICAM5Q9UMF0 924 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 SPEGQ15772 3267 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 CDC40O60508 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 OR7A10O76100 309 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 STK17BO94768 372 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 EFNB1P98172 346 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 SPCS2Q15005 226 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 OR5M10Q6IEU7 315 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 ZBTB46Q86UZ6 589 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 SLC43A2Q8N370 569 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 OR8K3Q8NH51 312 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 WDR77Q9BQA1 342 aaPredicted RBP13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 FN3KQ9H479 309 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 EXOSC4Q9NPD3 245 aaKnown RBP13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 TIMMDC1Q9NPL8 285 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 CMC2Q9NRP2 79 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 PADI1Q9ULC6 663 aa13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 EXOSC1Q9Y3B2 195 aaKnown RBP13.25□□□□□ -0.29
SHCBP1-201ENST00000303383 HTR3EA5X5Y0 456 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 M0R082 166 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 PTP4A3O75365 173 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 PEPDP12955 493 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 FXYD6P3P58550 94 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
SHCBP1-201ENST00000303383 ADCK1Q86TW2 530 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms