RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CAPN3P20807 821 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 NCS1P62166 190 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TUBA1BP68363 451 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TUBA4AP68366 448 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SEMA3BQ13214 749 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TUBA1AQ71U36 451 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 Q8N402 240 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 MYEOVQ96EZ4 313 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TNFRSF13CQ96RJ3 184 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ZMAT3Q9HA38 289 aaKnown RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 LRFN1Q9P244 771 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 HRH3Q9Y5N1 445 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SIGLEC1Q9BZZ2 1709 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 KLRC4-KLRK1H3BQV0 150 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 PRAMEF4O60810 478 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 HIST1H1TP22492 207 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SLC6A8P48029 635 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 METAP1P53582 386 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SPATA46Q5T0L3 261 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MINDY2Q8NBR6 621 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SLAMF9Q96A28 289 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TECTBQ96PL2 329 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MENTQ9BUN1 341 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 UBQLN4Q9NRR5 601 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 PLSCR3Q9NRY6 295 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SLC6A5Q9Y345 797 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 OR8U9P0C7N5 309 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 NKX2-5P52952 324 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SMAD4Q13485 552 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SPHARQ15513 63 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 HLA-BQ31612 363 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GUSBP11Q6P575 273 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 CORO6Q6QEF8 472 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM135Q86UB9 458 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MKXQ8IYA7 352 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GOLM1Q8NBJ4 401 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 OR11L1Q8NGX0 322 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 DCUN1D4Q92564 292 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 HRASLS5Q96KN8 279 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GSTO2Q9H4Y5 243 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 B3GNT3Q9Y2A9 372 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TMED7-TICAM2A0A0A6YYA0 188 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 ANXA7P20073 488 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 PRLHRP49683 370 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 RAB38P57729 211 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 ILKQ13418 452 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 COL19A1Q14993 1142 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 RANBP10Q6VN20 620 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM185AQ8NFB2 350 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM246Q9BRR3 403 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SEMA4CQ9C0C4 833 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TMED7Q9Y3B3 224 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 AGAP5A6NIR3 686 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 UBFD1O14562 309 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 EIF4EP06730 217 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 OR8G3PP0DMU2 310 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MFSD9Q8NBP5 474 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 OR8J3Q8NGG0 315 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SFXN5Q8TD22 340 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 KCNE4Q8WWG9 221 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 POP5Q969H6 163 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MRGPRX1Q96LB2 322 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 DPCDQ9BVM2 203 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 THAP10Q9P2Z0 257 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MYH2Q9UKX2 1941 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 NID2Q14112 1375 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 LRRTM2O43300 516 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 IGHG1P01857 330 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GM2AP17900 193 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 CHMP24386 653 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 KRBOX4Q5JUW0 171 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SFTPA1Q8IWL2 248 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 PPP1R35Q8TAP8 253 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GPR119Q8TDV5 335 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 RAB2BQ8WUD1 216 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 FBXO17Q96EF6 278 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 INTS14Q96SY0 518 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MGLLQ99685 303 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SEMA6CQ9H3T2 930 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 NOX3Q9HBY0 568 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 DLGAP1O14490 977 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 NXPH2O95156 264 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SELENOWP63302 87 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 SLC9A3R2Q15599 337 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MICAQ29983 383 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 PDSS2Q86YH6 399 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GCNT2Q8N0V5 402 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 OR5L1Q8NGL2 311 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TRMT2BQ96GJ1 504 aaKnown RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 CD300LBA8K4G0 201 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GPR75O95800 540 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 GUSBP08236 651 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 ARSBP15848 533 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF140P52738 457 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-201ENST00000303354 MTCP1P56278 107 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 CTC1Q2NKJ3 1217 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 COX20Q5RI15 118 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 AADACL4Q5VUY2 407 aa7.25□□□□□ -1.25
SCN9A-201ENST00000303354 TRNP1Q6NT89 227 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms