RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 CASP8Q14790 479 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 GPAT3Q53EU6 434 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 SPANXN4Q5MJ08 99 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 AP1ARQ63HQ0 302 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 GRINAQ7Z429 371 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 DTX2Q86UW9 622 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 APH1AQ96BI3 265 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 NEURL3Q96EH8 262 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 HS6ST2Q96MM7 605 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 GRIP2Q9C0E4 1043 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 OR11A1Q9GZK7 315 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 MARCOQ9UEW3 520 aaPredicted RBP17.3■□□□□ 0.36
CXCL3-201ENST00000296026 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.3■□□□□ 0.36
CXCL3-201ENST00000296026 CIB4A0PJX0 185 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 CLDN24A6NM45 220 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 BIRC5O15392 142 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 ADAM11O75078 769 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 PTNP21246 168 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 CHI3L1P36222 383 aaPredicted RBP17.29■□□□□ 0.36
CXCL3-201ENST00000296026 KRT71Q3SY84 523 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 DNM1P46Q6ZS02 220 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 ADGRG3Q86Y34 549 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 ARFGAP2Q8N6H7 521 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 OR52N5Q8NH56 324 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 PIGXQ8TBF5 258 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 SORT1Q99523 831 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 SLC35A5Q9BS91 424 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 EXOSC3Q9NQT5 275 aaKnown RBP17.29■□□□□ 0.36
CXCL3-201ENST00000296026 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.29■□□□□ 0.36
CXCL3-201ENST00000296026 HDGFL3Q9Y3E1 203 aa17.29■□□□□ 0.36
CXCL3-201ENST00000296026 CR1P17927 2039 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 GOLGA8QA0A0J9YX86 632 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 PRAMEF27A3QJZ7 478 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 GOLGA8OA6NCC3 632 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CCT8L1PA6NM43 557 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 GOLGA8NF8WBI6 632 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 GPR171O14626 319 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 DNPH1O43598 174 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 C1QCP02747 245 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 TP53P04637 393 aaPredicted RBP17.28■□□□□ 0.36
CXCL3-201ENST00000296026 LBPP18428 481 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CCNA2P20248 432 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 FKBP2P26885 142 aaKnown RBP17.28■□□□□ 0.36
CXCL3-201ENST00000296026 NTF4P34130 210 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 SLC1A6P48664 564 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 IDH2P48735 452 aaKnown RBP17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CLK1P49759 484 aaKnown RBP17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CLNS1AP54105 237 aaKnown RBP17.28■□□□□ 0.36
CXCL3-201ENST00000296026 HPCAP84074 193 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 PLAURQ03405 335 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CHRNEQ04844 493 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 DPY19L1Q2PZI1 675 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 FAM174BQ3ZCQ3 159 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 AGAP6Q5VW22 663 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 TMEM108Q6UXF1 575 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CCDC103Q8IW40 242 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CNOT9Q92600 299 aaKnown RBP17.28■□□□□ 0.36
CXCL3-201ENST00000296026 RADILQ96JH8 1075 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 NUF2Q9BZD4 464 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 BARX1Q9HBU1 254 aaPredicted RBP17.28■□□□□ 0.36
CXCL3-201ENST00000296026 ASB6Q9NWX5 421 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 B3GALT5Q9Y2C3 310 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CADP27708 2225 aa17.28■□□□□ 0.36
CXCL3-201ENST00000296026 CHD3Q12873 2000 aaKnown RBP17.27■□□□□ 0.36
CXCL3-201ENST00000296026 A0A1W2PR80 420 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 E9PBE3 544 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 HMGN4O00479 90 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 RGS16O15492 202 aaPredicted RBP17.27■□□□□ 0.36
CXCL3-201ENST00000296026 MRPL33O75394 65 aaKnown RBP17.27■□□□□ 0.36
CXCL3-201ENST00000296026 SNUPNO95149 360 aaKnown RBP17.27■□□□□ 0.36
CXCL3-201ENST00000296026 S100A3P33764 101 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 ZNF83P51522 516 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 SLC16A1P53985 500 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 OR2B6P58173 313 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 SSU72Q9NP77 194 aaKnown RBP17.27■□□□□ 0.36
CXCL3-201ENST00000296026 TMEM181Q9P2C4 612 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 MGAT4BQ9UQ53 548 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 SLC25A15Q9Y619 301 aa17.27■□□□□ 0.36
CXCL3-201ENST00000296026 E7EQL1 145 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 AP3D1O14617 1153 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 TM9SF1O15321 606 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 SSX4O60224 188 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 DHRS4L1P0CG22 281 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 BGNP21810 368 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 PTAFRP25105 342 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 MAGEA8P43361 318 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 HTR3AP46098 478 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 FOXG1P55316 489 aaPredicted RBP17.26■□□□□ 0.35
CXCL3-201ENST00000296026 SPOCK1Q08629 439 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 SYPL1Q16563 259 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 NRF1Q16656 503 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 WDR93Q6P2C0 686 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 SLC22A25Q6T423 547 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 KLHL17Q6TDP4 642 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 LSRQ86X29 649 aaPredicted RBP17.26■□□□□ 0.35
CXCL3-201ENST00000296026 RNF130Q86XS8 419 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 LRRC34Q8IZ02 419 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 ANKFN1Q8N957 763 aa17.26■□□□□ 0.35
CXCL3-201ENST00000296026 TEX37Q96LM6 180 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms