RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SGCEO43556 437 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 HRO43593 1189 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF254O75437 659 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ALDOCP09972 364 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 GAAP10253 952 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACP2P11117 423 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 DUSP3P51452 185 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SPEM2Q0P670 501 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 NKPD1Q17RQ9 610 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC6A19Q695T7 634 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 CREB3L2Q70SY1 520 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 RETREG3Q86VR2 466 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 TMEM163Q8TC26 289 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 C3orf49Q96BT1 292 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 MS4A4EQ96PG1 132 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PSD2Q9BQI7 771 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF442Q9H7R0 627 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ATG4BQ9Y4P1 393 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 V9GY05 133 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ATG2AQ2TAZ0 1938 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 A0A0D9SG52 128 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 A0A1W2PPC4 97 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 TP53I11O14683 189 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACOT8O14734 319 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC43A1O75387 559 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRSS56P0CW18 603 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 TRAPPC2P0DI81 140 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 TRAPPC2BP0DI82 140 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 DDCP20711 480 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 HNRNPKP61978 463 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■■□□ 18.3
SYNGAP1-201ENST00000293748 PLCXD2Q0VAA5 305 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SMN1Q16637 294 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 TMEM52BQ4KMG9 183 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 RFPL4BQ6ZWI9 263 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PGAP1Q75T13 922 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC46A3Q7Z3Q1 461 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR5M3Q8NGP4 307 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 MALSU1Q96EH3 234 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 TMEM68Q96MH6 324 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SSX3Q99909 188 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 EDEM2Q9BV94 578 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACPTQ9BZG2 426 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 DPH1Q9BZG8 443 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SIAEQ9HAT2 523 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 FZD3Q9NPG1 666 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 C2orf42Q9NWW7 574 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 IL20RAQ9UHF4 553 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 POU2F3Q9UKI9 436 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 DNMT3AQ9Y6K1 912 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 FAM230AA0A1W2PPH8 454 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 PEX14O75381 377 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TP53P04637 393 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TIMP2P16035 220 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 HOXB9P17482 250 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 SSTR2P30874 369 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 THBS2P35442 1172 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 NBL1P41271 181 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GIPRP48546 466 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 YPEL5P62699 121 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 SRSF5Q13243 272 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 FZD5Q13467 585 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 RPS26P11Q5JNZ5 115 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 RNF111Q6ZNA4 994 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 CDRT4Q8N9R6 151 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 CYB561A3Q8NBI2 242 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 KIAA1143Q96AT1 154 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZMYND19Q96E35 227 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 WDR77Q9BQA1 342 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 C20orf27Q9GZN8 174 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 C19orf12Q9NSK7 152 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GLTPQ9NZD2 209 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 NAALAD2Q9Y3Q0 740 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 NOX1Q9Y5S8 564 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TICRRQ7Z2Z1 1910 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TECTAO75443 2155 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 A8MU76 341 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GPRIN2O60269 458 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 C6P13671 934 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 PPP3CBP16298 524 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 BCL2A1Q16548 175 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TAZQ16635 292 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 AWAT2Q6E213 333 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF546Q86UE3 836 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR56B2PQ8NGI1 322 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 GLYATL2Q8WU03 294 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TMEM239Q8WW34 195 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZBTB8AQ96BR9 441 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 C1QTNF2Q9BXJ5 285 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 WASH6PQ9NQA3 447 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRDM9Q9NQV7 894 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 PSORS1C1Q9UIG5 152 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 KCNS2Q9ULS6 477 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACTL7AQ9Y615 435 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 RNF215Q9Y6U7 377 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 SRPX2O60687 465 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 KCNJ13O60928 360 aa11.04□□□□□ -0.64
SYNGAP1-201ENST00000293748 TYRP1P17643 537 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms