RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 MAGEB1P43366 347 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 RAP2BP61225 183 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 GNMTQ14749 295 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ACSM3Q53FZ2 586 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ACSM5Q6NUN0 579 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 LYPD4Q6UWN0 246 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 LACC1Q8IV20 430 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 PEX11GQ96HA9 241 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 SEC22AQ96IW7 307 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 FCRL1Q96LA6 429 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 CRB3Q9BUF7 120 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ZNF768Q9H5H4 540 aaKnown RBP11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 MBNL1Q9NR56 388 aaKnown RBP11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 GRHPRQ9UBQ7 328 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 CCL27Q9Y4X3 112 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 IFNA10P01566 189 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 IFNA4P05014 189 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ZNF16P17020 682 aaPredicted RBP11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 S1PR1P21453 382 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 CSRP3P50461 194 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 MECP2P51608 486 aaKnown RBP11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ACTC1P68032 377 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ACTA1P68133 377 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 TDGQ13569 410 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 FAM111BQ6SJ93 734 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 APOOLQ6UXV4 268 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ARL14Q8N4G2 192 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 THAP4Q8WY91 577 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 DHRS9Q9BPW9 319 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC5A7Q9GZV3 580 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 RNF32Q9H0A6 362 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ERVMER34-1Q9H9K5 563 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 MYOFQ9NZM1 2061 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 BDKRB2P30411 391 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 AFF3P51826 1226 aaKnown RBP11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 CAPZA1P52907 286 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ALG10BQ5I7T1 473 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 CSNK1A1LQ8N752 337 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 DUSP19Q8WTR2 217 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 FRZBQ92765 325 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 NEURL3Q96EH8 262 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 WDR92Q96MX6 357 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 AMDHD1Q96NU7 426 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 ARPC5LQ9BPX5 153 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 SMIM3Q9BZL3 60 aa11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 MTHFD2LQ9H903 347 aaPredicted RBP11.7□□□□□ -0.54
SLC6A1-201ENST00000287766 CLEC3AO75596 197 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 KNG1P01042 644 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 APEHP13798 732 aaKnown RBP11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 KCNJ5P48544 419 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TNFRSF17Q02223 184 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 DUSP6Q16828 381 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TANGO2Q6ICL3 276 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TCTN3Q6NUS6 607 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 ADAM5Q6NVV9 412 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC16A11Q8NCK7 471 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 NLGN4YQ8NFZ3 816 aaPredicted RBP11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 OR56B4Q8NH76 319 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 POLDIP3Q9BY77 421 aaKnown RBP11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC6A5Q9Y345 797 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 PARP14Q460N5 1801 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 SOCS6O14544 535 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TNFSF12O43508 249 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 RAB3AP20336 220 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 GNRHRP30968 328 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 PSMB10P40306 273 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 ACTBP60709 375 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 HERV-K104P61576 105 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 ACTG1P63261 375 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TMEM215Q68D42 235 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 BEND4Q6ZU67 534 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 SDR9C7Q8NEX9 313 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 MOAP1Q96BY2 351 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TMEM38AQ9H6F2 299 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 PRSS16Q9NQE7 514 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 DZANK1Q9NVP4 752 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 KLK4Q9Y5K2 254 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 SULT1C2O00338 296 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 IL12BP29460 328 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 HOXA9P31269 272 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 CCKBRP32239 447 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 HTR3AP46098 478 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 ILKQ13418 452 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 PLEKHN1Q494U1 663 aaPredicted RBP11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 ZMAT1Q5H9K5 638 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC29A4Q7RTT9 530 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 SFXN2Q96NB2 322 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 ZNF582Q96NG8 517 aaPredicted RBP11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 C12orf57Q99622 126 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TBL1XR1Q9BZK7 514 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 OR52D1Q9H346 318 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 AKIP1Q9NQ31 210 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 KLHL21Q9UJP4 597 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 CABIN1Q9Y6J0 2220 aa11.69□□□□□ -0.54
SLC6A1-201ENST00000287766 TRAPPC13A5PLN9 417 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms