RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FAM162AQ96A26 154 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 TAMM41Q96BW9 452 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ZNF524Q96C55 264 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ZFP3Q96NJ6 502 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 MCHR1Q99705 422 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 HOPXQ9BPY8 73 aaPredicted RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 SFXN3Q9BWM7 321 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 PRR14Q9BWN1 585 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 TAPBPLQ9BX59 468 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 SRXN1Q9BYN0 137 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ALG2Q9H553 416 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 C12orf49Q9H741 205 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 COQ10BQ9H8M1 238 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 TMEM27Q9HBJ8 222 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 SPAG4Q9NPE6 437 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 CHST11Q9NPF2 352 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ARL8BQ9NVJ2 186 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ADPRHL2Q9NX46 363 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 CMTM6Q9NX76 183 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 NDE1Q9NXR1 346 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 GMPR2Q9P2T1 348 aaKnown RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 TESQ9UGI8 421 aaKnown RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 OSGIN1Q9UJX0 560 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 PACSIN3Q9UKS6 424 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 PROCRQ9UNN8 238 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 SLC9A8Q9Y2E8 581 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 AP3M1Q9Y2T2 418 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 SH3GLB1Q9Y371 365 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 KLF2Q9Y5W3 355 aaPredicted RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 KALRNO60229 2985 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 A0A1B0GWA3 101 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 A0A1W2PNV4 684 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 C19orf84I3L1E1 186 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 FAAHO00519 579 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CXCR6O00574 342 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 ADAMDEC1O15204 470 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 EFNA2O43921 213 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 DNAJA2O60884 412 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 SHOX2O60902 331 aaPredicted RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 RCBTB2O95199 551 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 AHSA1O95433 338 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 NTN1O95631 604 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 NCK1P16333 377 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 TNFRSF1BP20333 461 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CD247P20963 164 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 HTR2AP28223 471 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CEACAM8P31997 349 aaPredicted RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 ACAA2P42765 397 aaKnown RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 GSK3BP49841 420 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 MNAT1P51948 309 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 PCBP3P57721 371 aaKnown RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 TAS2R41P59536 307 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 SLC25A3Q00325 362 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 SNTB1Q13884 538 aaKnown RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 VEZF1Q14119 521 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 OR7A5Q15622 319 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 DUSP7Q16829 419 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CYBRD1Q53TN4 286 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 FBXW10Q5XX13 1052 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 SP5Q6BEB4 398 aaPredicted RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 ZNF787Q6DD87 383 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 GTF2IRD2BQ6EKJ0 949 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 VWA1Q6PCB0 445 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 HACD2Q6Y1H2 254 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 MEX3BQ6ZN04 569 aaKnown RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 FKBP9P1Q75LS8 142 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 GTF2IRD2Q86UP8 949 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 COMTD1Q86VU5 262 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CARM1Q86X55 608 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CALHM3Q86XJ0 350 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 ADGRG3Q86Y34 549 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 SLC15A3Q8IY34 581 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 FITM2Q8N6M3 262 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 RELL2Q8NC24 303 aaPredicted RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 ABHD3Q8WU67 409 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 LZICQ8WZA0 190 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 C3orf49Q96BT1 292 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 SLC25A36Q96CQ1 311 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 GMPPAQ96IJ6 420 aaPredicted RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 ADGRG7Q96K78 797 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 ARL5BQ96KC2 179 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 ZNF583Q96ND8 569 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 UCN2Q96RP3 112 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 ZNF559Q9BR84 538 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 RBM24Q9BX46 236 aaKnown RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 TRIM2Q9C040 744 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 OPN3Q9H1Y3 402 aaPredicted RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 PIGMQ9H3S5 423 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 RNF122Q9H9V4 155 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 FAM53CQ9NYF3 392 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 TMEM181Q9P2C4 612 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 KLHL9Q9P2J3 617 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 KLHL13Q9P2N7 655 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 ZNF629Q9UEG4 869 aaPredicted RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 EGFL7Q9UHF1 273 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 BAG5Q9UL15 447 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 HDGFL3Q9Y3E1 203 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CHST2Q9Y4C5 530 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 V9GYQ6 96 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms