RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 NCBP2P52298 156 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PCBP4P57723 403 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 MAP4K2Q12851 820 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ZNF155Q12901 538 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PIN1Q13526 163 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 MANEAQ5SRI9 462 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 HBMQ6B0K9 141 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PGBD2Q6P3X8 592 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SFXN4Q6P4A7 337 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SEZ6L2Q6UXD5 910 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 FAM26EQ8N5C1 309 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 RXFP4Q8TDU9 374 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 TBX5Q99593 518 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 GPA33Q99795 319 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ANKRD19PQ9H560 264 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 KCNK12Q9HB15 430 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SIRT3Q9NTG7 399 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ZCCHC3Q9NUD5 404 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 KCND3Q9UK17 655 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PTPRSQ13332 1948 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PLXND1Q9Y4D7 1925 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 M0R3H8 397 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 TXNL1O43396 289 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 TBX19O60806 448 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 B4GALT2O60909 372 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 NME6O75414 186 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PAK4O96013 591 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 TBXA2RP21731 343 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 NTSP30990 170 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PTGER1P34995 402 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ATP6V1E1P36543 226 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 GIPRP48546 466 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 UBE2IP63279 158 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SNTB1Q13884 538 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 C2orf68Q2NKX9 166 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 RNLSQ5VYX0 342 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 OLIG3Q7RTU3 272 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 GNPDA2Q8TDQ7 276 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 MACROD1Q9BQ69 325 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 C7orf50Q9BRJ6 194 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 FAIM2Q9BWQ8 316 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 HDAC8Q9BY41 377 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 NPDC1Q9NQX5 325 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 MBNL1Q9NR56 388 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 MED11Q9P086 117 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 GHRLQ9UBU3 117 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SIRT4Q9Y6E7 314 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 TCF20Q9UGU0 1960 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 XIRP2A4UGR9 3374 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 LINC01553A4QN01 128 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 LRIT2A6NDA9 550 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PPM1DO15297 605 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ALPPL2P10696 532 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ERGP11308 486 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 PTHLHP12272 177 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ADCYAP1P18509 176 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 NFYBP25208 207 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 GDNFP39905 211 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 BUD31P41223 144 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 EPHA4P54764 986 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 CSNK1G2P78368 415 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 HES5Q5TA89 166 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 METTL11BQ5VVY1 283 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SLITRK4Q8IW52 837 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 OR4D11Q8NGI4 311 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 THAP6Q8TBB0 222 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ACOT12Q8WYK0 555 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 SMARCD2Q92925 531 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 INSM2Q96T92 566 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 POLDIP3Q9BY77 421 aaKnown RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 GLIPR2Q9H4G4 154 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 LHX9Q9NQ69 397 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 ACSS1Q9NUB1 689 aaPredicted RBP7.05□□□□□ -1.28
TRIM6-201ENST00000278302 DCAF16Q9NXF7 216 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 NDOR1Q9UHB4 597 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 IL20RAQ9UHF4 553 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 FBXW2Q9UKT8 454 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 KCNK6Q9Y257 313 aa7.05□□□□□ -1.28
TRIM6-201ENST00000278302 KIAA1549LQ6ZVL6 1849 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 A0A1W2PPV9 198 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 OR6C65A6NJZ3 312 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 GATCO43716 136 aaKnown RBP7.04□□□□□ -1.28
TRIM6-201ENST00000278302 PRAMEF2O60811 474 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 ICOSLGO75144 302 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 PRKRAO75569 313 aaKnown RBP7.04□□□□□ -1.28
TRIM6-201ENST00000278302 IGHV2-70P01814 119 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 IFNA4P05014 189 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 ARFIP1P53367 373 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 H2BFSP57053 126 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 RAB40BQ12829 278 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 SLC9A5Q14940 896 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 PDGFRLQ15198 375 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 C21orf62-AS1Q17RA5 79 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 GAB4Q2WGN9 574 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 ACER2Q5QJU3 275 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 PIP5KL1Q5T9C9 394 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 B3GNTL1Q67FW5 361 aaPredicted RBP7.04□□□□□ -1.28
TRIM6-201ENST00000278302 PODNL1Q6PEZ8 512 aa7.04□□□□□ -1.28
TRIM6-201ENST00000278302 USP53Q70EK8 1073 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms