RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 KLF9Q13886 244 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 FGFBP1Q14512 234 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ST3GAL2Q16842 350 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 SLC30A6Q6NXT4 461 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 WASH2PQ6VEQ5 465 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ADCK2Q7Z695 626 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 OR4F15Q8NGB8 312 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ACOT11Q8WXI4 607 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TSACCQ96A04 125 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 KLHL15Q96M94 604 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 WDR92Q96MX6 357 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 DPYSL5Q9BPU6 564 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TEX101Q9BY14 249 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 DPEP2Q9H4A9 486 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 FGF22Q9HCT0 170 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TRIM36Q9NQ86 728 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 WASH6PQ9NQA3 447 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 CALML5Q9NZT1 146 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF624Q9P2J8 865 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 COL5A1P20908 1838 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 A0A1B0GUH1 482 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 MED19A0JLT2 244 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 LRRN3E7EW58 273 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF593O00488 134 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 GIMD1P0DJR0 217 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 LCN1P31025 176 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF81P51508 661 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 MECP2P51608 486 aaKnown RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 SIM1P81133 766 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 CDK3Q00526 305 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TRIP6Q15654 476 aaKnown RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 PRAMEF13Q5VWM6 474 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 B3GNTL1Q67FW5 361 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ENPP7Q6UWV6 458 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ADAMTSL4Q6UY14 1074 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TFAP2EQ6VUC0 442 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF620Q6ZNG0 422 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 ASB18Q6ZVZ8 466 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 C16orf62Q7Z3J2 963 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 KLBQ86Z14 1044 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 MMP21Q8N119 569 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 MS4A15Q8N5U1 240 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 EIF4E3Q8N5X7 224 aaKnown RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 SAMD12Q8N8I0 201 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 BRIX1Q8TDN6 353 aaKnown RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 OR1E3Q8WZA6 343 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 RGMAQ96B86 450 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TIMP4Q99727 224 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 LRRC61Q9BV99 259 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 LRRN3Q9H3W5 708 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 PHPT1Q9NRX4 125 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 AKAP7Q9P0M2 348 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 APOBEC3BQ9UH17 382 aaKnown RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 RASD1Q9Y272 281 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TRAV6A0A075B6T7 132 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 CIB4A0PJX0 185 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 M0R233 179 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 SAP18O00422 153 aaKnown RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 PEX14O75381 377 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 PPM1BO75688 479 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 B3GALNT1O75752 331 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 SCO1O75880 301 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 OR5F1O95221 314 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 CPN1P15169 458 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 ACADLP28330 430 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 HSD17B2P37059 387 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 GPR1P46091 355 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 REEP5Q00765 189 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF267Q14586 743 aaPredicted RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 ARHGAP19Q14CB8 494 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF791Q3KP31 576 aaPredicted RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 NUDT13Q86X67 352 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 SIAH3Q8IW03 269 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 TRMT10AQ8TBZ6 339 aaKnown RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 CDC6Q99741 560 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 ZCCHC2Q9C0B9 1178 aaKnown RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 DDX31Q9H8H2 851 aaKnown RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 H2AFY2Q9P0M6 372 aaPredicted RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 ING1Q9UK53 422 aaPredicted RBP9.54□□□□□ -0.88
UPF3B-201ENST00000276201 KCNMB2Q9Y691 235 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 SESN1Q9Y6P5 492 aa9.54□□□□□ -0.88
UPF3B-201ENST00000276201 A8MXK9 166 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 TOR1AO14656 332 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 SCAMP1O15126 338 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 APOL3O95236 402 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 RASGRP1O95267 797 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 CHRM4P08173 479 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 CELA2BP08218 269 aaPredicted RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 GIPP09681 153 aaPredicted RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ACSM4P0C7M7 580 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ALPPL2P10696 532 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PDHA2P29803 388 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 TAS2R41P59536 307 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ZP1P60852 638 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 FUT5Q11128 374 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 MADCAM1Q13477 382 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 MAPK14Q16539 360 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms