RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CBARPQ8N350 705 aaPredicted RBP8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 THAP6Q8TBB0 222 aa8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 BRIX1Q8TDN6 353 aaKnown RBP8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 RNF208Q9H0X6 261 aa8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 TMEM231Q9H6L2 316 aa8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 ASF1BQ9NVP2 202 aa8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 GPN3Q9UHW5 284 aaPredicted RBP8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 ST6GALNAC2Q9UJ37 374 aa8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 FBXL4Q9UKA2 621 aa8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 KCNE3Q9Y6H6 103 aa8.49□□□□□ -1.05
HMGCLL1-201ENST00000274901 A0A087WV48 116 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 LRIT2A6NDA9 550 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 NEDD8-MDP1E9PL57 170 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 CACNB4O00305 520 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 FLRT2O43155 660 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ZNF821O75541 412 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 STC2O76061 302 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 EOMESO95936 686 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 RNF224P0DH78 156 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TMIGD3P0DMS9 266 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 NR2F1P10589 423 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ALPPL2P10696 532 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 NPPBP16860 134 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 PDHA2P29803 388 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 PYCR1P32322 319 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 RPS11P62280 158 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TBPL1P62380 186 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ECH1Q13011 328 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 SGCAQ16586 387 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 JMJD6Q6NYC1 403 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 DBX2Q6ZNG2 339 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 FAM83HQ6ZRV2 1179 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 FCRLAQ7L513 359 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 DEFB128Q7Z7B8 93 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TMEM255BQ8WV15 326 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 SMPDL3AQ92484 453 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 DIO2Q92813 273 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TCEAL3Q969E4 200 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 EXOSC8Q96B26 276 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 OR14A2Q96R54 314 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 NRTNQ99748 197 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 SLC25A18Q9H1K4 315 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 UBQLN3Q9H347 655 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TMEM185BQ9H7F4 350 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 GPN1Q9HCN4 374 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 POT1Q9NUX5 634 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 WBP1LQ9NX94 342 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 KLHL9Q9P2J3 617 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 GHRLQ9UBU3 117 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 MKL2Q9ULH7 1088 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 COL4A3Q01955 1670 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 GNB5O14775 395 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 MT-ND5P03915 603 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 RB1P06400 928 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 KLK3P07288 261 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 UBBP0CG47 229 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 UBCP0CG48 685 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 MGMTP16455 207 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 FPR3P25089 353 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 MPIP34949 423 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 RORAP35398 523 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 CD96P40200 585 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 GCGRP47871 477 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 PNLIPRP1P54315 467 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 PNLIPRP2P54317 469 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 AP1S1P61966 158 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 RPS27AP62979 156 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 UBA52P62987 128 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 PDZK1IP1Q13113 114 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 PLEKHN1Q494U1 663 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 LY6G6FQ5SQ64 297 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TMEM71Q6P5X7 295 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TSSK4Q6SA08 328 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 MEPCEQ7L2J0 689 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ARMC10Q8N2F6 343 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 DNAAF1Q8NEP3 725 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ZNF480Q8WV37 535 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 SMPDL3BQ92485 455 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 SCAMP4Q969E2 229 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ARMC5Q96C12 935 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ALG14Q96F25 216 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 UROC1Q96N76 676 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 PAPOLGQ9BWT3 736 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 OR51M1Q9H341 326 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 SEBOXQ9HB31 216 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 WSB2Q9NYS7 404 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 H2AFY2Q9P0M6 372 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TRPC4Q9UBN4 977 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 FOXJ3Q9UPW0 622 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 RPH3AQ9Y2J0 694 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 ZNF337Q9Y3M9 751 aa8.48□□□□□ -1.05
HMGCLL1-201ENST00000274901 TRAV1-2A0A0B4J238 106 aa8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 NAP1L6A6NFF2 107 aa8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 C5orf52A6NGY3 159 aa8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 COLCA2A8K830 154 aa8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 FOXE1O00358 373 aaPredicted RBP8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 KPNA3O00505 521 aaPredicted RBP8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 COCHO43405 550 aa8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 TBL1XO60907 577 aa8.47□□□□□ -1.05
HMGCLL1-201ENST00000274901 SLCO2B1O94956 709 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms