RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DPH1Q9BZG8 443 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 HHATLQ9HCP6 504 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 C20orf141Q9NUB4 165 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 BAIAP2Q9UQB8 552 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 CARD8Q9Y2G2 431 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 PTRH2Q9Y3E5 179 aaKnown RBP14.03□□□□□ -0.16
COPS3-201ENST00000268717 LOC400499M0QZD8 3231 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 MGAQ8IWI9 3026 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 IGHV1-45A0A0A0MS14 117 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 TMEM200CA6NKL6 621 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 ZNF99A8MXY4 864 aaPredicted RBP14.02□□□□□ -0.16
COPS3-201ENST00000268717 EFCAB9A8MZ26 197 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 M0R129 80 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 PRKYO43930 277 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 ACVR2AP27037 513 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 GRK5P34947 590 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 ZNF117Q03924 483 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 PIGFQ07326 219 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 NDUFAF6Q330K2 333 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 SYT6Q5T7P8 510 aaPredicted RBP14.02□□□□□ -0.16
COPS3-201ENST00000268717 TMEM164Q5U3C3 297 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 UBE2UQ5VVX9 321 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 FAM199XQ6PEV8 388 aaPredicted RBP14.02□□□□□ -0.16
COPS3-201ENST00000268717 C6orf15Q6UXA7 325 aaPredicted RBP14.02□□□□□ -0.16
COPS3-201ENST00000268717 SLC22A8Q8TCC7 542 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 NACC2Q96BF6 587 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 TMCO6Q96DC7 493 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 ARSGQ96EG1 525 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 IL4I1Q96RQ9 567 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 RHNO1Q9BSD3 238 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 CDCA4Q9BXL8 241 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 SPRY4Q9C004 299 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 LHPPQ9H008 270 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 OR52D1Q9H346 318 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 ACOT13Q9NPJ3 140 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 PTTG2Q9NZH5 202 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 FOXJ2Q9P0K8 574 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 PADI1Q9ULC6 663 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 LHX6Q9UPM6 363 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 SIGLEC7Q9Y286 467 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 PCDHGB6Q9Y5F9 930 aa14.02□□□□□ -0.16
COPS3-201ENST00000268717 IRGMA1A4Y4 181 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CCDC160A6NGH7 325 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 SURF4O15260 269 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 KLK10O43240 276 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 OIP5O43482 229 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 TLX2O43763 284 aaPredicted RBP14.01□□□□□ -0.17
COPS3-201ENST00000268717 CDC40O60508 579 aaKnown RBP eCLIP14.01□□□□□ -0.17
COPS3-201ENST00000268717 PTP4A3O75365 173 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 BMP7P18075 431 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 PGCP20142 388 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 FOLR3P41439 243 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 MASP1P48740 699 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 TMBIM6P55061 237 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 SUMO3P55854 103 aaPredicted RBP14.01□□□□□ -0.17
COPS3-201ENST00000268717 IRF3Q14653 427 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 SYT14P1Q58G82 188 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 PLAG1Q6DJT9 500 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 SMARCD3Q6STE5 483 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CBLN3Q6UW01 205 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CLVS1Q8IUQ0 354 aaPredicted RBP14.01□□□□□ -0.17
COPS3-201ENST00000268717 STX19Q8N4C7 294 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 TMCO5AQ8N6Q1 288 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 GATSQ8NAP1 163 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 OR5W2Q8NH69 310 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 M1APQ8TC57 530 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 LIPHQ8WWY8 451 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 HGDQ93099 445 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 C8orf44Q96CB5 159 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CRELD1Q96HD1 420 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 LRR1Q96L50 414 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 IMMP1LQ96LU5 166 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 BCL7BQ9BQE9 202 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 ADAM19Q9H013 955 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 UBQLN3Q9H347 655 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 FN3KQ9H479 309 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CXorf56Q9H5V9 222 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 MMP25Q9NPA2 562 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 ATP13A2Q9NQ11 1180 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 MRPS18AQ9NVS2 196 aaKnown RBP14.01□□□□□ -0.17
COPS3-201ENST00000268717 MYOTQ9UBF9 498 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 SSUH2Q9Y2M2 353 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 ENO4A6NNW6 628 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 KDM4EB2RXH2 506 aaPredicted RBP14.01□□□□□ -0.17
COPS3-201ENST00000268717 BHLHE40O14503 412 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 ADAM10O14672 748 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 PRODHO43272 600 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 HCRTR2O43614 444 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 SAGP10523 405 aaPredicted RBP14.01□□□□□ -0.17
COPS3-201ENST00000268717 COX6A1P12074 109 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CD82P27701 267 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 P2RX1P51575 399 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 NUDT6P53370 316 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 FXYD6P3P58550 94 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CRYZQ08257 329 aaKnown RBP14.01□□□□□ -0.17
COPS3-201ENST00000268717 ST3GAL4Q11206 333 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CLN3Q13286 438 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 CBFBQ13951 182 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 B3GNT6Q6ZMB0 384 aa14.01□□□□□ -0.17
COPS3-201ENST00000268717 MARCH3Q86UD3 253 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms