RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SPAARA0A1B0GVQ0 90 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 H3BSA7 217 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 GNB5O14775 395 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 ITGA10O75578 1167 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 SEC14L2O76054 403 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 OR7A10O76100 309 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 HPP00738 406 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 BMP7P18075 431 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 F8A1P23610 371 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 ACVR2AP27037 513 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 OTX2P32243 289 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 GRK5P34947 590 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 SLC9A3P48764 834 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 SUMO3P55854 103 aaPredicted RBP14.9□□□□□ -0.02
TPM1-201ENST00000267996 DLX5P56178 289 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 MVKQ03426 396 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 THSD4Q6ZMP0 1018 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 OAFQ86UD1 273 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 OR10G3Q8NGC4 313 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 OR52L1Q8NGH7 329 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 OR13F1Q8NGS4 319 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 MCCC2Q9HCC0 563 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 GPR83Q9NYM4 423 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 OSGIN1Q9UJX0 560 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 YARS2Q9Y2Z4 477 aaKnown RBP14.9□□□□□ -0.02
TPM1-201ENST00000267996 PCDHGB6Q9Y5F9 930 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.9□□□□□ -0.02
TPM1-201ENST00000267996 ANKUB1A6NFN9 424 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 KDM4EB2RXH2 506 aaPredicted RBP14.9□□□□□ -0.02
TPM1-201ENST00000267996 B4DXG7 233 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 RAD1O60671 282 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 GP1BBP13224 206 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 ICAM2P13598 275 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 CSRP1P21291 193 aaKnown RBP14.9□□□□□ -0.02
TPM1-201ENST00000267996 EGR4Q05215 589 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 CHAF1BQ13112 559 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 TUBA3CQ13748 450 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 QPRTQ15274 297 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 COL28A1Q2UY09 1125 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 TMEM81Q6P7N7 255 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 TMPRSS12Q86WS5 348 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 LRR1Q96L50 414 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 ZNF582Q96NG8 517 aaPredicted RBP14.9□□□□□ -0.02
TPM1-201ENST00000267996 TNFRSF13CQ96RJ3 184 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 IL20RAQ9UHF4 553 aa14.9□□□□□ -0.02
TPM1-201ENST00000267996 RPL36Q9Y3U8 105 aaKnown RBP14.9□□□□□ -0.02
TPM1-201ENST00000267996 TRAV27A0A087WT01 109 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 STSP08842 583 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 MSX1P28360 303 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
TPM1-201ENST00000267996 SOX3P41225 446 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 MLF1P58340 268 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 ST3GAL4Q11206 333 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 IRF3Q14653 427 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 OPN5Q6U736 354 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 RTL4Q6ZR62 310 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 RPS19BP1Q86WX3 136 aaKnown RBP14.89□□□□□ -0.03
TPM1-201ENST00000267996 CYP4Z2PQ8N1L4 340 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 OR51A7Q8NH64 312 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 NTNG2Q96CW9 530 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 LHPPQ9H008 270 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 ACOT13Q9NPJ3 140 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 MRPS18AQ9NVS2 196 aaKnown RBP14.89□□□□□ -0.03
TPM1-201ENST00000267996 TAS2R10Q9NYW0 307 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 FBXL4Q9UKA2 621 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 BAIAP2Q9UQB8 552 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 ZNF337Q9Y3M9 751 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 MPDZO75970 2070 aa14.89□□□□□ -0.03
TPM1-201ENST00000267996 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 ETV2O00321 342 aaPredicted RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 TM4SF5O14894 197 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 MAN1A2O60476 641 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 DBTP11182 482 aaKnown RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 DLSTP36957 453 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 CASP3P42574 277 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 MAP2K4P45985 399 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 POLR2HP52434 150 aaKnown RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 RPS4XP62701 263 aaKnown RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 ZNF91Q05481 1191 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 ZNF74Q16587 644 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 CNPY1Q3B7I2 92 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 AADACL4Q5VUY2 407 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 BICRALQ6AI39 1079 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 H3F3CQ6NXT2 135 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 GRINAQ7Z429 371 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 BCDIN3DQ7Z5W3 292 aaKnown RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 DND1Q8IYX4 353 aaKnown RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 ST8SIA1Q92185 356 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 PCSK5Q92824 1860 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 SECISBP2Q96T21 854 aaKnown RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 CDCA4Q9BXL8 241 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 CDCP1Q9H5V8 836 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 CPNE5Q9HCH3 593 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 GALNT9Q9HCQ5 603 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 SDHAF3Q9NRP4 125 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 P4HTMQ9NXG6 502 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 CHCHD2Q9Y6H1 151 aaPredicted RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 RIF1Q5UIP0 2472 aaKnown RBP14.88□□□□□ -0.03
TPM1-201ENST00000267996 ZNF292O60281 2723 aa14.88□□□□□ -0.03
TPM1-201ENST00000267996 CFAP54Q96N23 3096 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms