RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 NPPBP16860 134 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 CSNK2A2P19784 350 aaPredicted RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 PRKCZQ05513 592 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 DYRK1AQ13627 763 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 NUP43Q8NFH3 380 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 STEAP2Q8NFT2 490 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 OR5AR1Q8NGP9 310 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 CCDC107Q8WV48 283 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 NEURL3Q96EH8 262 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 SCLYQ96I15 445 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 PCDHB10Q9UN67 800 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 TMEM229AB2RXF0 380 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 FCMRO60667 390 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 OAZ2O95190 189 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 UBBP0CG47 229 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 UBCP0CG48 685 aaKnown RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 EPXP11678 715 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 EPHB3P54753 998 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 S100A10P60903 97 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 MAP2K5Q13163 448 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 CBFBQ13951 182 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 SLC36A2Q495M3 483 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 RHOUQ7L0Q8 258 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 CHST9Q7L1S5 443 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 RD3Q7Z3Z2 195 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 TPRA1Q86W33 373 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 OR1S2Q8NGQ3 325 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 SFT2D1Q8WV19 159 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 TMED6Q8WW62 240 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 TFGQ92734 400 aaPredicted RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 MRPL48Q96GC5 212 aaKnown RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 HMX1Q9NP08 348 aaPredicted RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 ABRACLQ9P1F3 81 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 ACOT7O00154 380 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 SEMA7AO75326 666 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 F11P03951 625 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 ASGR1P07306 291 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 CD34P28906 385 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 IRS1P35568 1242 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 PNLIPRP1P54315 467 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 POLR2GP62487 172 aaKnown RBP eCLIP15.12■□□□□ 0.01
GPC1-201ENST00000264039 KHDRBS2Q5VWX1 349 aaKnown RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 GDPD4Q6W3E5 623 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 NAA40Q86UY6 237 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 GJD3Q8N144 294 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 RASGEF1AQ8N9B8 481 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 MAFIPQ8WZ33 124 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 FATE1Q969F0 183 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 ADAD1Q96M93 576 aaKnown RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 TMEM27Q9HBJ8 222 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 MED31Q9Y3C7 131 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 FAM96BQ9Y3D0 163 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 MAP1BP46821 2468 aaKnown RBP15.11■□□□□ 0.01
GPC1-201ENST00000264039 BLOC1S5-TXNDC5H3BN57 136 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 PQBP1O60828 265 aaKnown RBP15.11■□□□□ 0.01
GPC1-201ENST00000264039 CRYBA1P05813 215 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 KCNAB1Q14722 419 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 C1orf94Q6P1W5 598 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 C22orf39Q6P5X5 142 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 ZC3H14Q6PJT7 736 aaKnown RBP15.11■□□□□ 0.01
GPC1-201ENST00000264039 RSPO2Q6UXX9 243 aaPredicted RBP15.11■□□□□ 0.01
GPC1-201ENST00000264039 THEM6Q8WUY1 208 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 HGDQ93099 445 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 SRA1Q9HD15 236 aaKnown RBP15.11■□□□□ 0.01
GPC1-201ENST00000264039 ZDHHC4Q9NPG8 344 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 MIOXQ9UGB7 285 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 KCNE3Q9Y6H6 103 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 LTBP3Q9NS15 1303 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 OR6C68A6NDL8 312 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 NDUFS4O43181 175 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 FBXO24O75426 580 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 CHRM4P08173 479 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 EPCAMP16422 314 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 CDK2P24941 298 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 PCBP3P57721 371 aaKnown RBP15.11■□□□□ 0.01
GPC1-201ENST00000264039 CDK5Q00535 292 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 KLHL26Q53HC5 615 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 TAS1R1Q7RTX1 841 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 DEFB128Q7Z7B8 93 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 OR2AK2Q8NG84 335 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 OR9A2Q8NGT5 310 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 SMIM4Q8WVI0 70 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 ARL11Q969Q4 196 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 RSRP1Q9BUV0 290 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 LGR4Q9BXB1 951 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 HCAR1Q9BXC0 346 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 FBXO4Q9UKT5 387 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 GPR55Q9Y2T6 319 aaPredicted RBP15.11■□□□□ 0.01
GPC1-201ENST00000264039 V9GY05 133 aa15.11■□□□□ 0.01
GPC1-201ENST00000264039 ZNF860A6NHJ4 632 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 LRRC72A6NJI9 287 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 SLC16A5O15375 505 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 LEFTY1O75610 366 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 PCDH8O95206 1070 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 HOXD10P28358 340 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 GUCA2AQ02747 115 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 GAS6Q14393 721 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 TSC22D1Q15714 1073 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 FAM122BQ7Z309 247 aa15.1■□□□□ 0.01
GPC1-201ENST00000264039 TIFAQ96CG3 184 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms