RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 EIF4E2O60573 245 aaKnown RBP15.16■□□□□ 0.02
SDCBP-201ENST00000260130 ATE1O95260 518 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 RNF224P0DH78 156 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 GABRA1P14867 456 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 FGFBP1Q14512 234 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 DCST1Q5T197 706 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF773Q6PK81 442 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 FKBP9P1Q75LS8 142 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 WDYHV1Q96HA8 205 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 DMRTA2Q96SC8 542 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 PIGQQ9BRB3 760 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 AGAP5A6NIR3 686 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 AHRRA9YTQ3 701 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 LINC01387J3KSC0 135 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 ZG16O60844 167 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 PRSS23O95084 383 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 CSTAP01040 98 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 HOXD4P09016 255 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 CPN1P15169 458 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 CHRNB3Q05901 458 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 DAG1Q14118 895 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 NDUFAF6Q330K2 333 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 HMGN2P46Q86SG4 172 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 C10orf111Q8N326 155 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 OR8J3Q8NGG0 315 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 PHF10Q8WUB8 498 aaKnown RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 BORCS5Q969J3 196 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 NRBF2Q96F24 287 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 TMEM19Q96HH6 336 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 RDH12Q96NR8 316 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 TREX2Q9BQ50 279 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 CPPED1Q9BRF8 314 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 PIF1Q9H611 641 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 A4GALTQ9NPC4 353 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 TBC1D23Q9NUY8 699 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 MED17Q9NVC6 651 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 USP22Q9UPT9 525 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 CAMK2AQ9UQM7 478 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 SLC35A3Q9Y2D2 325 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 V9GYQ6 96 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 OR2M5A3KFT3 312 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 TRIM64BA6NI03 449 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 NUDT14O95848 222 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 HPRP00739 348 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 MT-ND1P03886 318 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 PTGER4P35408 488 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 STARP49675 285 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF41P51814 821 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 SUMO3P55854 103 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 KCNJ10P78508 379 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 OTUD3Q5T2D3 398 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 RTL6Q6ICC9 239 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 TMEM211Q6ICI0 200 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 TBPL2Q6SJ96 375 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 OR5M1Q8NGP8 315 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 MAL2Q969L2 176 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 SDCCAG3Q96C92 435 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 KLHDC3Q9BQ90 382 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 THUMPD3Q9BV44 507 aaKnown RBP15.15■□□□□ 0.02
SDCBP-201ENST00000260130 LAT2Q9GZY6 243 aa15.15■□□□□ 0.02
SDCBP-201ENST00000260130 A0A0G2JPF8 293 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 HNRNPCL2B2RXH8 293 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 HNRNPCL3B7ZW38 293 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 FAM47E-STBD1D6RA91 191 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 FREM3P0C091 2139 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 HNRNPCL4P0DMR1 293 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 THRBP10828 461 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 JUNBP17275 347 aaPredicted RBP15.14■□□□□ 0.01
SDCBP-201ENST00000260130 GGT1P19440 569 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 EEF1B2P24534 225 aaKnown RBP15.14■□□□□ 0.01
SDCBP-201ENST00000260130 LHX2P50458 406 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 NEDD8Q15843 81 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 TMEM44Q2T9K0 475 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 PLPPR5Q32ZL2 321 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF829Q3KNS6 432 aaPredicted RBP15.14■□□□□ 0.01
SDCBP-201ENST00000260130 NCCRP1Q6ZVX7 275 aaPredicted RBP15.14■□□□□ 0.01
SDCBP-201ENST00000260130 PEX5LQ8IYB4 626 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 RPRMLQ8N4K4 120 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 TMCO5AQ8N6Q1 288 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 TOR1AIP2Q8NFQ8 470 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 ZBTB8AQ96BR9 441 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 FAM210AQ96ND0 272 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 NTN4Q9HB63 628 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 ZNF337Q9Y3M9 751 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 FAM215AQ9Y5M1 114 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 DSPPQ9NZW4 1301 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 CYP7B1O75881 506 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 ALPLP05186 524 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 DBIP07108 87 aaKnown RBP15.14■□□□□ 0.01
SDCBP-201ENST00000260130 IL7RP16871 459 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 RPS4Y1P22090 263 aaKnown RBP15.14■□□□□ 0.01
SDCBP-201ENST00000260130 TMBIM6P55061 237 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 ADORA2A-AS1P86434 159 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 EPS8Q12929 822 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 SKP2Q13309 424 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 BCL2A1Q16548 175 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 RBM48Q5RL73 367 aaKnown RBP15.14■□□□□ 0.01
SDCBP-201ENST00000260130 GCNT6Q5T4J0 391 aa15.14■□□□□ 0.01
SDCBP-201ENST00000260130 C1orf185Q5T7R7 199 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms