RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 YIPF5Q969M3 257 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 ELSPBP1Q96BH3 223 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 ZMYND19Q96E35 227 aaPredicted RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 ERMAPQ96PL5 475 aaPredicted RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 TTTY10Q9BZA0 68 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 DPAGT1Q9H3H5 408 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 GHITMQ9H3K2 345 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 CLEC4AQ9UMR7 237 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 MYO9BQ13459 2157 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 UNC80Q8N2C7 3258 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 C7orf66A4D0T2 115 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 NOTOA8MTQ0 251 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 SERPINA3P01011 423 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 TFP02787 698 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 HOXB2P14652 356 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 ATF1P18846 271 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 CCDC58Q4VC31 144 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 LYPD4Q6UWN0 246 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 LYPD8Q6UX82 237 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 SYT9Q86SS6 491 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 TOMM5Q8N4H5 51 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 ZNF655Q8N720 491 aaPredicted RBP14.03□□□□□ -0.16
DDX56-201ENST00000258772 BMPERQ8N8U9 685 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 OR4D9Q8NGE8 314 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 OR4K13Q8NH42 304 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 SIPA1Q96FS4 1042 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 TRIM2Q9C040 744 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 ZCCHC4Q9H5U6 513 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 DNAJB12Q9NXW2 375 aaKnown RBP14.03□□□□□ -0.16
DDX56-201ENST00000258772 CHRNA9Q9UGM1 479 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 HYAL3O43820 417 aaPredicted RBP14.03□□□□□ -0.16
DDX56-201ENST00000258772 UBL3O95164 117 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 TCRBP04435 133 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 CD3GP09693 182 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 EPXP11678 715 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 SNRPBP14678 240 aaKnown RBP14.03□□□□□ -0.16
DDX56-201ENST00000258772 HIST1H1CP16403 213 aaKnown RBP14.03□□□□□ -0.16
DDX56-201ENST00000258772 MMP15P51511 669 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 PSG6Q00889 435 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 CRYZQ08257 329 aaKnown RBP14.03□□□□□ -0.16
DDX56-201ENST00000258772 CEP78Q5JTW2 689 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 MANEAQ5SRI9 462 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 ZNF767PQ75MW2 155 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 SLC43A2Q8N370 569 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 LRRC17Q8N6Y2 441 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 LSMEM1Q8N8F7 131 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 PATE1Q8WXA2 126 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 PELI1Q96FA3 418 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 IRF2BPLQ9H1B7 796 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 CD93Q9NPY3 652 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 DZANK1Q9NVP4 752 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 ABRACLQ9P1F3 81 aa14.03□□□□□ -0.16
DDX56-201ENST00000258772 A0A0B4J203 849 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 TNFRSF10CO14798 259 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 OR2T7P0C7T2 308 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 GDI2P50395 445 aaKnown RBP14.02□□□□□ -0.16
DDX56-201ENST00000258772 SRP54P61011 504 aaKnown RBP14.02□□□□□ -0.16
DDX56-201ENST00000258772 GAS6Q14393 721 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 CDK5R1Q15078 307 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 CLPPQ16740 277 aaPredicted RBP14.02□□□□□ -0.16
DDX56-201ENST00000258772 FBXO46Q6PJ61 603 aaPredicted RBP14.02□□□□□ -0.16
DDX56-201ENST00000258772 LINC00114Q6XXX2 140 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 RNF44Q7L0R7 432 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 C9orf62Q8N4C0 152 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 FAM98AQ8NCA5 519 aaKnown RBP14.02□□□□□ -0.16
DDX56-201ENST00000258772 SDR9C7Q8NEX9 313 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 OR4N2Q8NGD1 307 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 OR51L1Q8NGJ5 315 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 OR2T27Q8NH04 317 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 HAVCR2Q8TDQ0 301 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 PHF21AQ96BD5 680 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 SMIM19Q96E16 107 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 ZFP3Q96NJ6 502 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 FBRSQ9HAH7 460 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 STARD5Q9NSY2 213 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 MRPS7Q9Y2R9 242 aaKnown RBP14.02□□□□□ -0.16
DDX56-201ENST00000258772 NUBP2Q9Y5Y2 271 aa14.02□□□□□ -0.16
DDX56-201ENST00000258772 C2orf74A8MZ97 194 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 FLRT2O43155 660 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 IGKV1D-16P01601 117 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 SLC35E2P0CK97 266 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 GBX2P52951 348 aaPredicted RBP14.02□□□□□ -0.17
DDX56-201ENST00000258772 SIRPAP78324 504 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 DGCR2P98153 550 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 PITPNAQ00169 270 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 ANKRD54Q6NXT1 300 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 SIAH3Q8IW03 269 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 SYS1Q8N2H4 156 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 CSNK1A1LQ8N752 337 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 MTIF3Q9H2K0 278 aaKnown RBP14.02□□□□□ -0.17
DDX56-201ENST00000258772 ICAM5Q9UMF0 924 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 SCML1Q9UN30 329 aa14.02□□□□□ -0.17
DDX56-201ENST00000258772 HEATR5AQ86XA9 2040 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 TEX13CA0A0J9YWL9 993 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 ARL6IP5O75915 188 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 NDUFB2O95178 105 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 KLF8O95600 359 aaPredicted RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 S1PR1P21453 382 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 STOMP27105 288 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 GIFP27352 417 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms