RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 KLF5Q13887 457 aaPredicted RBP4.48□□□□□ -1.69
TCN1-201ENST00000257264 C3AR1Q16581 482 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 FBXO48Q5FWF7 155 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 CTSL3PQ5NE16 218 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 OR52E8Q6IFG1 317 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 ZFP1Q6P2D0 407 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 Q6ZPA2 131 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 ZNF788Q6ZQV5 615 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 LCNL1Q6ZST4 164 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 ZNF627Q7L945 461 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 SLC26A9Q7LBE3 791 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 CACUL1Q86Y37 369 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 TMEM123Q8N131 208 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 FAM89BQ8N5H3 189 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 COMMD1Q8N668 190 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 LRRC52Q8N7C0 313 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 SMRP1Q8NCR6 262 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 SMG7Q92540 1137 aaKnown RBP4.48□□□□□ -1.69
TCN1-201ENST00000257264 HSFY1Q96LI6 401 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 AGAP3Q96P47 875 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 CSPG4P5Q96PW8 444 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 IL12RB2Q99665 862 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 DCTN5Q9BTE1 182 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 SHARPINQ9H0F6 387 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 CSTL1Q9H114 145 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 FKRPQ9H9S5 495 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 DMAP1Q9NPF5 467 aaPredicted RBP4.48□□□□□ -1.69
TCN1-201ENST00000257264 UFSP2Q9NUQ7 469 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 HMGXB4Q9UGU5 601 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 STAP1Q9ULZ2 295 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 COMMD3-BMI1R4GMX3 469 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 LRRC37A2A6NM11 1700 aa4.48□□□□□ -1.69
TCN1-201ENST00000257264 CITO14578 2027 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 MGAMO43451 1857 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 RALGAPA2Q2PPJ7 1873 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SNTNA6NMZ2 147 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 CYB561D2O14569 222 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 STX7O15400 261 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 SYNGR3O43761 229 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 TSPAN2O60636 221 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SAP30O75446 220 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 KRT33AO76009 404 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 STAMBPO95630 424 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 OTCP00480 354 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 C1QAP02745 245 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 UBTFL6P0CB48 400 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 OR8G3PP0DMU2 310 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 FGF3P11487 239 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 HOXB2P14652 356 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SGSHP51688 502 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 KPNA2P52292 529 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 PLA2G16P53816 162 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 PROK1P58294 105 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 RPS4XP62701 263 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 RPL10AP62906 217 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 MRPS6P82932 125 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 PRPSAP1Q14558 356 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 GANABQ14697 944 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 SF3B4Q15427 424 aaKnown RBP eCLIP4.47□□□□□ -1.69
TCN1-201ENST00000257264 HSDL1Q3SXM5 330 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SLC25A52Q3SY17 297 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 LIN52Q52LA3 116 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 NCBP2-AS2Q69YL0 99 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 DMKNQ6E0U4 476 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 ZCCHC23Q6ZST2 131 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 FCRLAQ7L513 359 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 ACOT1Q86TX2 421 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SATL1Q86VE3 508 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 RANBP3LQ86VV4 465 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 C10orf107Q8IVU9 208 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SLC38A6Q8IZM9 456 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 DEFB107AQ8IZN7 70 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 LINC00518Q8N0U6 118 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 KCNG3Q8TAE7 436 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 ISG20Q96AZ6 181 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 CERS2Q96G23 380 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SH3YL1Q96HL8 342 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 C12orf66Q96MD2 445 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 TGM7Q96PF1 710 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 PPP1R2P1Q96PQ5 205 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 ILKAPQ9H0C8 392 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 SUDS3Q9H7L9 328 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 RAB18Q9NP72 206 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 GPATCH2LQ9NWQ4 482 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 HIF1ANQ9NWT6 349 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SLC2A8Q9NY64 477 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 BFARQ9NZS9 450 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 POU2F3Q9UKI9 436 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 RALYQ9UKM9 306 aaKnown RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 ELF5Q9UKW6 265 aaPredicted RBP4.47□□□□□ -1.69
TCN1-201ENST00000257264 POMT2Q9UKY4 750 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 EMCNQ9ULC0 261 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 CA5BQ9Y2D0 317 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 SLC6A5Q9Y345 797 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 INSL5Q9Y5Q6 135 aa4.47□□□□□ -1.69
TCN1-201ENST00000257264 A0A087X1B8 175 aa4.46□□□□□ -1.7
TCN1-201ENST00000257264 NDUFS8O00217 210 aa4.46□□□□□ -1.7
TCN1-201ENST00000257264 BTN3A3O00478 584 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms