RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 UTP23Q9BRU9 249 aaKnown RBP17.66■□□□□ 0.42
PTPRE-201ENST00000254667 LYRM4Q9HD34 91 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 CACNG2Q9Y698 323 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 SLC5A10A0PJK1 596 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 TOXO94900 526 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 CNOT4O95628 575 aaKnown RBP17.66■□□□□ 0.42
PTPRE-201ENST00000254667 FAM111BQ6SJ93 734 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 TBC1D15Q8TC07 691 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 NPRL2Q8WTW4 380 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 TXNDC15Q96J42 360 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 CXorf36Q9H7Y0 433 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 MMP17Q9ULZ9 603 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 J3KTA2 159 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 MRPL33O75394 65 aaKnown RBP17.66■□□□□ 0.42
PTPRE-201ENST00000254667 ATP1B3P54709 279 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 SLC35A1P78382 337 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 MBTPS1Q14703 1052 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 TMEM68Q96MH6 324 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 SLC6A18Q96N87 628 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 A0A1B0GUL6 1792 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 TRBV4-1A0A0J9YWV2 114 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 FAM71E1Q6IPT2 247 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 DPY19L2P1Q6NXN4 242 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 ZNF784Q8NCA9 323 aaPredicted RBP17.66■□□□□ 0.42
PTPRE-201ENST00000254667 STEAP2Q8NFT2 490 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 SYNPRQ8TBG9 265 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 PRRT1Q99946 306 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 PHF7Q9BWX1 381 aaPredicted RBP17.66■□□□□ 0.42
PTPRE-201ENST00000254667 GLIPR2Q9H4G4 154 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 TBX21Q9UL17 535 aa17.66■□□□□ 0.42
PTPRE-201ENST00000254667 CLDN24A6NM45 220 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 TACR3P29371 465 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 C14orf28Q4W4Y0 310 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 C18orf63Q68DL7 685 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 VASNQ6EMK4 673 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 DNAJC22Q8N4W6 341 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 LMNTD1Q8N9Z9 388 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.65■□□□□ 0.42
PTPRE-201ENST00000254667 SCN7AQ01118 1682 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 GYPBP06028 91 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 LPLP06858 475 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 MYOGP15173 224 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 MSX1P28360 303 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 YOD1Q5VVQ6 348 aaPredicted RBP17.65■□□□□ 0.42
PTPRE-201ENST00000254667 LANCL3Q6ZV70 420 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 ZNF740Q8NDX6 193 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 OR13C2Q8NGS9 318 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 FER1L6-AS2Q96M78 137 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 GAREM1Q9H706 876 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 DNAJB11Q9UBS4 358 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 TARM1B6A8C7 271 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 RAD1O60671 282 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 BCL6P41182 706 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 ADPRHP54922 357 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 ADARB1P78563 741 aaKnown RBP17.65■□□□□ 0.42
PTPRE-201ENST00000254667 SHHQ15465 462 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 SLC25A18Q9H1K4 315 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 TRAV36DV7A0A075B6V5 113 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 A0A0G2JMP0 313 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 CAPNS1P04632 268 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 OPRL1P41146 370 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 PTRH1Q86Y79 214 aaKnown RBP17.65■□□□□ 0.42
PTPRE-201ENST00000254667 OR4M2Q8NGB6 313 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 TMEM246Q9BRR3 403 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 ELOVL3Q9HB03 270 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 CORINQ9Y5Q5 1042 aa17.65■□□□□ 0.42
PTPRE-201ENST00000254667 CDHR4A6H8M9 788 aa17.64■□□□□ 0.42
PTPRE-201ENST00000254667 EIF1P41567 113 aaKnown RBP17.64■□□□□ 0.42
PTPRE-201ENST00000254667 TMEM31Q5JXX7 168 aa17.64■□□□□ 0.42
PTPRE-201ENST00000254667 RSPO2Q6UXX9 243 aaPredicted RBP17.64■□□□□ 0.42
PTPRE-201ENST00000254667 MKXQ8IYA7 352 aa17.64■□□□□ 0.42
PTPRE-201ENST00000254667 TDHQ8IZJ6 230 aa17.64■□□□□ 0.42
PTPRE-201ENST00000254667 PELI3Q8N2H9 469 aa17.64■□□□□ 0.42
PTPRE-201ENST00000254667 ZNF281Q9Y2X9 895 aa17.64■□□□□ 0.42
PTPRE-201ENST00000254667 FAM183AA6NL82 134 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 UBFD1O14562 309 aaKnown RBP17.64■□□□□ 0.41
PTPRE-201ENST00000254667 PAPD4Q6PIY7 484 aaKnown RBP17.64■□□□□ 0.41
PTPRE-201ENST00000254667 ZNF454Q8N9F8 522 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 BRIX1Q8TDN6 353 aaKnown RBP17.64■□□□□ 0.41
PTPRE-201ENST00000254667 PLSCR5A0PG75 271 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 UTS2O95399 124 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 GASTP01350 101 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 BMP4P12644 408 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 STK11Q15831 433 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 TMEM176BQ3YBM2 270 aaPredicted RBP17.64■□□□□ 0.41
PTPRE-201ENST00000254667 TRIM61Q5EBN2 209 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 LRRC28Q86X40 367 aaPredicted RBP17.64■□□□□ 0.41
PTPRE-201ENST00000254667 ZNF566Q969W8 418 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 PBDC1Q9BVG4 233 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 VN1R3Q9BXE9 311 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 PAQR5Q9NXK6 330 aaPredicted RBP17.64■□□□□ 0.41
PTPRE-201ENST00000254667 FAM230AA0A1W2PPH8 454 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 OR5K3A6NET4 321 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 RAB40ALP0C0E4 278 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 ERVK-16P61578 105 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 OR5M10Q6IEU7 315 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 RAB40AQ8WXH6 277 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 SORCS2Q96PQ0 1159 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 THAP7Q9BT49 309 aaPredicted RBP17.64■□□□□ 0.41
PTPRE-201ENST00000254667 PDFQ9HBH1 243 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms