RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 BBC3Q96PG8 261 aaPredicted RBP18.18■□□□□ 0.5
SNRPA-201ENST00000243563 ZNF347Q96SE7 839 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 ZNF426Q9BUY5 554 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 QPCTLQ9NXS2 382 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 DNAJB9Q9UBS3 223 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 MAGED1Q9Y5V3 778 aaPredicted RBP18.18■□□□□ 0.5
SNRPA-201ENST00000243563 A0A087WUJ7 227 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 H0YC42 278 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 SUSD5O60279 629 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 GADD45GO95257 159 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 TPD52P55327 224 aaPredicted RBP18.17■□□□□ 0.5
SNRPA-201ENST00000243563 ST3GAL3Q11203 375 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 GLYR1Q49A26 553 aaPredicted RBP18.17■□□□□ 0.5
SNRPA-201ENST00000243563 FGD3Q5JSP0 725 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 ANKRD34AQ69YU3 496 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 PODNL1Q6PEZ8 512 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 PFN4Q8NHR9 129 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 DNAJA4Q8WW22 397 aaPredicted RBP18.17■□□□□ 0.5
SNRPA-201ENST00000243563 SFXN2Q96NB2 322 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 ACKR4Q9NPB9 350 aa18.17■□□□□ 0.5
SNRPA-201ENST00000243563 PRRC2CQ9Y520 2896 aaKnown RBP18.17■□□□□ 0.5
SNRPA-201ENST00000243563 A0A087WUU8 490 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 A0A1W2PRQ8 180 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ELOA3DA6NLF2 546 aaPredicted RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 H3BML4 177 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 IGHG3P01860 377 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ZNF17P17021 662 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 FASP25445 335 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 DGCR6Q14129 220 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 TRAM2Q15035 370 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ELOA3BQ3SY89 546 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ELOA3Q8NG57 546 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ARL5BQ96KC2 179 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 YY1AP1Q9H869 796 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ASF1BQ9NVP2 202 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 CHRNA9Q9UGM1 479 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 SAMHD1Q9Y3Z3 626 aaKnown RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 KPNA4O00629 521 aaPredicted RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 MGRN1O60291 552 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 LDLRP01130 860 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 THRBP10828 461 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 SFTPCP11686 197 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ANPEPP15144 967 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 CXCR1P25024 350 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 ADH6P28332 368 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 APOBEC1P41238 236 aaKnown RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 EIF1P41567 113 aaKnown RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 TDGF1P3P51864 188 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 CLDN15P56746 228 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 CLDN20P56880 219 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 C3AR1Q16581 482 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 SWT1Q5T5J6 900 aaKnown RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 FAM180AQ6UWF9 173 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 FGD2Q7Z6J4 655 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 CHERPQ8IWX8 916 aaKnown RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 PQLC1Q8N2U9 271 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 SMPDL3BQ92485 455 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 PIGQQ9BRB3 760 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 MEPEQ9NQ76 525 aaPredicted RBP18.16■□□□□ 0.5
SNRPA-201ENST00000243563 PLSCR2Q9NRY7 297 aa18.16■□□□□ 0.5
SNRPA-201ENST00000243563 SHANK1Q9Y566 2161 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 TRGV5A0A0B4J1U4 118 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 LRRN3E7EW58 273 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 TNFRSF11BO00300 401 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 ADAMDEC1O15204 470 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 ATXN7O15265 892 aaPredicted RBP18.15■□□□□ 0.5
SNRPA-201ENST00000243563 BAG2O95816 211 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 BMP7P18075 431 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 SFTPDP35247 375 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 HTR3AP46098 478 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 HMGA2P52926 109 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 SUCLG1P53597 346 aaKnown RBP18.15■□□□□ 0.5
SNRPA-201ENST00000243563 NFATC3Q12968 1075 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 GGNQ86UU5 652 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 NEIL3Q8TAT5 605 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 NR4A3Q92570 626 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 KTI12Q96EK9 354 aaPredicted RBP18.15■□□□□ 0.5
SNRPA-201ENST00000243563 ALPK1Q96QP1 1244 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 REEP1Q9H902 201 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 C12orf10Q9HB07 376 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 C20orf141Q9NUB4 165 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 SVILO95425 2214 aa18.15■□□□□ 0.5
SNRPA-201ENST00000243563 SH3PXD2BA1X283 911 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 NPIPB7O75200 414 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 DEAF1O75398 565 aaPredicted RBP18.14■□□□□ 0.49
SNRPA-201ENST00000243563 PNMTP11086 282 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 HOXB6P17509 224 aaKnown RBP18.14■□□□□ 0.49
SNRPA-201ENST00000243563 LHX2P50458 406 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 SELENBP1Q13228 472 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 EPHX4Q8IUS5 362 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 OR9Q2Q8NGE9 314 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 TMEM239Q8WW34 195 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 PTDSS2Q9BVG9 487 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 SELENONQ9NZV5 590 aa18.14■□□□□ 0.49
SNRPA-201ENST00000243563 A0A1W2PNR3 127 aa18.13■□□□□ 0.49
SNRPA-201ENST00000243563 SAC3D1A6NKF1 404 aa18.13■□□□□ 0.49
SNRPA-201ENST00000243563 GNGT2O14610 69 aa18.13■□□□□ 0.49
SNRPA-201ENST00000243563 CRYABP02511 175 aaKnown RBP18.13■□□□□ 0.49
SNRPA-201ENST00000243563 ELK4P28324 431 aa18.13■□□□□ 0.49
SNRPA-201ENST00000243563 MLLT10P55197 1068 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms