RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PCDHGB7Q9Y5F8 929 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 PRUNE2Q8WUY3 3088 aa14.85□□□□□ -0.03
UBE3D-201ENST00000237186 SMIM30A4D0T7 59 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 OR2W5A6NFC9 320 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 LMO7DNF2Z398 122 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 ARPC3O15145 178 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 CD1CP29017 333 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 EPHA4P54764 986 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 GGTLC2Q14390 218 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 GRM7Q14831 915 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 PYDC2Q56P42 97 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 FNDC7Q5VTL7 733 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 FCRLBQ6BAA4 426 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF544Q6NX49 715 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF517Q6ZMY9 492 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 DPY19L2P2Q6ZN68 376 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 VASH1Q7L8A9 365 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 RAB43Q86YS6 212 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 TEX19Q8NA77 164 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 CYB561A3Q8NBI2 242 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 OR5M3Q8NGP4 307 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 KCTD12Q96CX2 325 aaKnown RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 ZDHHC12Q96GR4 267 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 ERMAPQ96PL5 475 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 DDOQ99489 341 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 SPRTNQ9H040 489 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 FBXL4Q9UKA2 621 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 MMACHCQ9Y4U1 282 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 CACNA1IQ9P0X4 2223 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 E9PI62 339 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 HPGDSO60760 199 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 SLC19A2O60779 497 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 PGDP52209 483 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 SLC16A1P53985 500 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 GFERP55789 205 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 HNRNPKP61978 463 aaKnown RBP eCLIP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 CSTF1Q05048 431 aaKnown RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 CARTPTQ16568 116 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 HBMQ6B0K9 141 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 DMKNQ6E0U4 476 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 PXKQ7Z7A4 578 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 TPRA1Q86W33 373 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 RDH10Q8IZV5 341 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 OR52E2Q8NGJ4 325 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 LIPHQ8WWY8 451 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 C3orf49Q96BT1 292 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 PHOX2BQ99453 314 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 C11orf54Q9H0W9 315 aaPredicted RBP14.84□□□□□ -0.03
UBE3D-201ENST00000237186 LANCL2Q9NS86 450 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 ADAM30Q9UKF2 790 aa14.84□□□□□ -0.03
UBE3D-201ENST00000237186 H3BMH7 237 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 PLA2G10O15496 165 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 IDH3BO43837 385 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 IFNA16P05015 189 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 OR2T7P0C7T2 308 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 HIST1H1CP16403 213 aaKnown RBP14.83□□□□□ -0.04
UBE3D-201ENST00000237186 KCNJ8Q15842 424 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 FAAH2Q6GMR7 532 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 SLITRK4Q8IW52 837 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 CARFQ8N187 725 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 SYS1Q8N2H4 156 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 MS4A15Q8N5U1 240 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 POMGNT2Q8NAT1 580 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 OR2T27Q8NH04 317 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 ABHD4Q8TB40 342 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 PTPMT1Q8WUK0 201 aaPredicted RBP14.83□□□□□ -0.04
UBE3D-201ENST00000237186 C4orf36Q96KX1 117 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 ART5Q96L15 291 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 PGLYRP3Q96LB9 341 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 TGM7Q96PF1 710 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 DEPDC7Q96QD5 511 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 GPX7Q96SL4 187 aaPredicted RBP14.83□□□□□ -0.04
UBE3D-201ENST00000237186 NRIP3Q9NQ35 241 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 EXOSC3Q9NQT5 275 aaKnown RBP14.83□□□□□ -0.04
UBE3D-201ENST00000237186 SOHLH2Q9NX45 425 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 ZNF337Q9Y3M9 751 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 KNL1Q8NG31 2342 aa14.83□□□□□ -0.04
UBE3D-201ENST00000237186 DVL2O14641 736 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 HYAL3O43820 417 aaPredicted RBP14.82□□□□□ -0.04
UBE3D-201ENST00000237186 ATP6V1G1O75348 118 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 NCR1O76036 304 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 CD1AP06126 327 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 MRPL3P09001 348 aaKnown RBP14.82□□□□□ -0.04
UBE3D-201ENST00000237186 TRAPPC2P0DI81 140 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 TRAPPC2BP0DI82 140 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 APEX1P27695 318 aaKnown RBP14.82□□□□□ -0.04
UBE3D-201ENST00000237186 PPICP45877 212 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 NRG3P56975 720 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 OR12D2P58182 307 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 RPS4XP62701 263 aaKnown RBP14.82□□□□□ -0.04
UBE3D-201ENST00000237186 C14orf28Q4W4Y0 310 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 NR2C2APQ86WQ0 139 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 C7orf57Q8NEG2 295 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 HLA-CQ95604 372 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 MVB12AQ96EY5 273 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 SLC46A1Q96NT5 459 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 UBQLN4Q9NRR5 601 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 GMEB2Q9UKD1 530 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 IER3IP1Q9Y5U9 82 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 SCN2AQ99250 2005 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms