RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ELOVL7A1L3X0 281 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 SHISA8B8ZZ34 492 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 M0QX08 132 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 SYT5O00445 386 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 GSTA4O15217 222 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 ZNF208O43345 1280 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 RCBTB2O95199 551 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 IL18BPO95998 194 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CRHP06850 196 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CXCR1P25024 350 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 HTR1EP28566 365 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CEACAM8P31997 349 aaPredicted RBP10.14□□□□□ -0.79
SF3B6-201ENST00000233468 SFTPDP35247 375 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CLDN20P56880 219 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 PCBP3P57721 371 aaKnown RBP10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CSNK2A1P68400 391 aaPredicted RBP10.14□□□□□ -0.79
SF3B6-201ENST00000233468 SLC25A35Q3KQZ1 300 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 TMEM176BQ3YBM2 270 aaPredicted RBP10.14□□□□□ -0.79
SF3B6-201ENST00000233468 C16orf89Q6UX73 402 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CCDC80Q76M96 950 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 ADGRE4PQ86SQ3 457 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 RANBP3LQ86VV4 465 aaPredicted RBP10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CALHM3Q86XJ0 350 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 C10orf111Q8N326 155 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CLIP4Q8N3C7 705 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CADM2Q8N3J6 435 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 MARVELD2Q8N4S9 558 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 OR10D3Q8NH80 312 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 LILRB4Q8NHJ6 448 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 BCAS4Q8TDM0 211 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 LZICQ8WZA0 190 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CPNE4Q96A23 557 aaPredicted RBP10.14□□□□□ -0.79
SF3B6-201ENST00000233468 DDIT4LQ96D03 193 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 ZHX1-C8orf76Q96EF9 292 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 ZNF583Q96ND8 569 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 ZNF559Q9BR84 538 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 GPATCH1Q9BRR8 931 aaKnown RBP10.14□□□□□ -0.79
SF3B6-201ENST00000233468 TRIM8Q9BZR9 551 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 TRIM2Q9C040 744 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 PIF1Q9H611 641 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 TMEM185BQ9H7F4 350 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 SPAG4Q9NPE6 437 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 GLRX2Q9NS18 164 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 RLIMQ9NVW2 624 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 CHRNA9Q9UGM1 479 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 BAG5Q9UL15 447 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 RNF6Q9Y252 685 aa10.14□□□□□ -0.79
SF3B6-201ENST00000233468 A0A0G2JNJ9 132 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 C19orf84I3L1E1 186 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 TNFSF11O14788 317 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 MFN2O95140 757 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 GKN3PP0CG01 181 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 TMIGD3P0DMS9 266 aaPredicted RBP10.13□□□□□ -0.79
SF3B6-201ENST00000233468 TFPIP10646 304 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 CTSSP25774 331 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 TACR3P29371 465 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 GZMMP51124 257 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 SLC7A2P52569 658 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 SUCLG1P53597 346 aaKnown RBP10.13□□□□□ -0.79
SF3B6-201ENST00000233468 RGS8P57771 180 aaPredicted RBP10.13□□□□□ -0.79
SF3B6-201ENST00000233468 PSME3P61289 254 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 MXRA7P84157 204 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 LIPEQ05469 1076 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 PON3Q15166 354 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 PPP4R4Q6NUP7 873 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 POMZP3Q6PJE2 187 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 NCCRP1Q6ZVX7 275 aaPredicted RBP10.13□□□□□ -0.79
SF3B6-201ENST00000233468 GGNQ86UU5 652 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 SLC15A3Q8IY34 581 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 MICU2Q8IYU8 434 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 RPRMLQ8N4K4 120 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 ATP6V1C2Q8NEY4 427 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 DNAJA4Q8WW22 397 aaPredicted RBP10.13□□□□□ -0.79
SF3B6-201ENST00000233468 PROX1Q92786 737 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 OSTF1Q92882 214 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 SFXN3Q9BWM7 321 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 ALG2Q9H553 416 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 C12orf10Q9HB07 376 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 TMEM27Q9HBJ8 222 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 CLCF1Q9UBD9 225 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 Q9UFV3 132 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 TESQ9UGI8 421 aaKnown RBP10.13□□□□□ -0.79
SF3B6-201ENST00000233468 SLC9A8Q9Y2E8 581 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 HDGFL3Q9Y3E1 203 aa10.13□□□□□ -0.79
SF3B6-201ENST00000233468 TMED7-TICAM2A0A0A6YYA0 188 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 A0A0J9YW62 118 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 AP3D1O14617 1153 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 DNPH1O43598 174 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 FMO6PO60774 539 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 BCAS1O75363 584 aaPredicted RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 LGI1O95970 557 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 PLGP00747 810 aaPredicted RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 PNMTP11086 282 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 IFNA8P32881 189 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 PEX19P40855 299 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 ACAA2P42765 397 aaKnown RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 KCNJ5P48544 419 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 RAC3P60763 192 aa10.12□□□□□ -0.79
SF3B6-201ENST00000233468 RNPS1Q15287 305 aaKnown RBP10.12□□□□□ -0.79
SF3B6-201ENST00000233468 SPATS1Q496A3 300 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms