RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 WDR45BQ5MNZ6 344 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 TMEM91Q6ZNR0 172 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 CADM3Q8N126 398 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 ATP6V1C2Q8NEY4 427 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 OR5M3Q8NGP4 307 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 LIPHQ8WWY8 451 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 OTULINQ96BN8 352 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 BABAM2Q9NXR7 383 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 ZMIZ1Q9ULJ6 1067 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 POLHQ9Y253 713 aa17.54■□□□□ 0.4
YBX3-201ENST00000228251 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.53■□□□□ 0.4
YBX3-201ENST00000228251 SHISA3A0PJX4 238 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 BOLA2-SMG1P6H3BVE0 249 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 GABRPO00591 440 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 PPM1BO75688 479 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 PTTG1O95997 202 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 HLA-DPB1P04440 258 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 MYF5P13349 255 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 MST1P26927 711 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 ZP2Q05996 745 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 RUNX1T1Q06455 604 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 TMPRSS11AQ6ZMR5 421 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 KANSL1Q7Z3B3 1105 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 ATG4DQ86TL0 474 aaPredicted RBP17.53■□□□□ 0.4
YBX3-201ENST00000228251 GATAD2AQ86YP4 633 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 LRRC17Q8N6Y2 441 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 CYB561A3Q8NBI2 242 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 ZNF524Q96C55 264 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 ZNF501Q96CX3 271 aaPredicted RBP17.53■□□□□ 0.4
YBX3-201ENST00000228251 LCORQ96JN0 433 aaPredicted RBP17.53■□□□□ 0.4
YBX3-201ENST00000228251 NUDT9Q9BW91 350 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 TPK1Q9H3S4 243 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 GSTK1Q9Y2Q3 226 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 CMAHPQ9Y471 501 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 HTR3EA5X5Y0 456 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 MCIDASD6RGH6 385 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 LRRN3E7EW58 273 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 REM1O75628 298 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 UTS2O95399 124 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 ALAS2P22557 587 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 ZNF85Q03923 595 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 ISXQ2M1V0 245 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 GLYR1Q49A26 553 aaPredicted RBP17.53■□□□□ 0.4
YBX3-201ENST00000228251 KLHL12Q53G59 568 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 GPX7Q96SL4 187 aaPredicted RBP17.53■□□□□ 0.4
YBX3-201ENST00000228251 LRRN3Q9H3W5 708 aa17.53■□□□□ 0.4
YBX3-201ENST00000228251 A8MUA0 341 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 ARPC3O15145 178 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 OR7A10O76100 309 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 UBL4AP11441 157 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 LCN1P31025 176 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 CD97P48960 835 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 GGTLC2Q14390 218 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 EBPQ15125 230 aaKnown RBP17.52■□□□□ 0.4
YBX3-201ENST00000228251 YOD1Q5VVQ6 348 aaPredicted RBP17.52■□□□□ 0.4
YBX3-201ENST00000228251 WBP2NLQ6ICG8 309 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 CBLN3Q6UW01 205 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 ZNF527Q8NB42 609 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 C7orf57Q8NEG2 295 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 ERMAPQ96PL5 475 aaPredicted RBP17.52■□□□□ 0.4
YBX3-201ENST00000228251 TMEM43Q9BTV4 400 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 TMED9Q9BVK6 235 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 OR8D2Q9GZM6 311 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 SRRQ9GZT4 340 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 OR51V1Q9H2C8 321 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 ZNF768Q9H5H4 540 aaKnown RBP17.52■□□□□ 0.4
YBX3-201ENST00000228251 ZNF304Q9HCX3 659 aa17.52■□□□□ 0.4
YBX3-201ENST00000228251 GTPBP1O00178 669 aaKnown RBP17.51■□□□□ 0.39
YBX3-201ENST00000228251 GNB5O14775 395 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 TO15178 435 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 RNF13O43567 381 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 IFNGP01579 166 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 DCNP07585 359 aaKnown RBP17.51■□□□□ 0.39
YBX3-201ENST00000228251 HIST1H1CP16403 213 aaKnown RBP17.51■□□□□ 0.39
YBX3-201ENST00000228251 CD53P19397 219 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 FBLP22087 321 aaKnown RBP17.51■□□□□ 0.39
YBX3-201ENST00000228251 ARL4DP49703 201 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 INSL4Q14641 139 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.51■□□□□ 0.393e-7■■□□□ 14.4
YBX3-201ENST00000228251 DPY19L2P2Q6ZN68 376 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 C9orf40Q8IXQ3 194 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 Q8N9G6 341 aaPredicted RBP17.51■□□□□ 0.39
YBX3-201ENST00000228251 POC5Q8NA72 575 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 CEP19Q96LK0 163 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 ELF4Q99607 663 aaPredicted RBP17.51■□□□□ 0.39
YBX3-201ENST00000228251 CDX2Q99626 313 aaPredicted RBP17.51■□□□□ 0.39
YBX3-201ENST00000228251 KLHDC3Q9BQ90 382 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 NDC1Q9BTX1 674 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 HDHD5Q9BXW7 423 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 NMNAT2Q9BZQ4 307 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 RERGLQ9H628 205 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 ABCB9Q9NP78 766 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 NRIP3Q9NQ35 241 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 MUTYHQ9UIF7 546 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 KLHL21Q9UJP4 597 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 EXPH5Q8NEV8 1989 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 A0A1B0GX78 115 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 DAPL1A0PJW8 107 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 SYNDIG1LA6NDD5 238 aa17.51■□□□□ 0.39
YBX3-201ENST00000228251 SPNP16150 400 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms